Maximum likelihood phylogenetic reconstruction from high-resolution whole-genome data and a tree of 68 eukaryotes. (Q30591232)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

Maximum likelihood phylogenetic reconstruction from high-resolution whole-genome data and a tree of 68 eukaryotes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

1 reference

whole genome sequencing

1 reference

4

Bernard M E Moret

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

author name string

Yu Lin

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Fei Hu

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Jijun Tang

series ordinal

3

1 reference

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24 February 2020

publication date

1 January 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

Pacific Symposium on Biocomputing

24 February 2020

published in

1 reference

13 October 2017

285-296

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

Fast and accurate phylogenetic reconstruction from high-resolution whole-genome data and a novel robustness estimator.

24 February 2020

cites work

1 reference

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20 June 2018

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Different phylogenomic approaches to resolve the evolutionary relationships among model fish species

20 June 2018

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The genome of the Western clawed frog Xenopus tropicalis

20 June 2018

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Estimating true evolutionary distances under rearrangements, duplications, and losses

20 June 2018

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A fungal phylogeny based on 82 complete genomes using the composition vector method

20 June 2018

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The Trichoplax genome and the nature of placozoans

20 June 2018

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The functional repertoires of metazoan genomes

20 June 2018

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Estimating true evolutionary distances under the DCJ model

20 June 2018

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Phylogenomics reshuffles the eukaryotic supergroups

20 June 2018

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Assessing performance of orthology detection strategies applied to eukaryotic genomes

20 June 2018

1 reference

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A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

20 June 2018

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

20 June 2018

1 reference

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Rearrangements in the chloroplast genomes of mung bean and pea

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

Inversions in the Third Chromosome of Wild Races of Drosophila Pseudoobscura, and Their Use in the Study of the History of the Species

20 June 2018

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Efficient sorting of genomic permutations by translocation, inversion and block interchange

20 June 2018

1 reference

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The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids.

20 June 2018

1 reference

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Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle

20 June 2018

1 reference

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Genome-scale evolution: reconstructing gene orders in the ancestral species.

20 June 2018

1 reference

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A new implementation and detailed study of breakpoint analysis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

Genome phylogeny based on gene content

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

Chloroplast DNA rearrangements are more frequent when a large inverted repeat sequence is lost

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

Computational complexity of inferring phylogenies from chromosome inversion data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

The neighbor-joining method: a new method for reconstructing phylogenetic trees

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

A simple method for phylogenomic inference using the information of gene content of genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

Phylogenetic trees based on gene content

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3712796

26 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23424133

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Breakpoint Phylogenies

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23424133

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23424133%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

PubMed publication ID

23424133

1 reference