Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity. (Q33654343)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24682283%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

title

Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity (English)

1 reference

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alternative mRNA splicing, via spliceosome

12 March 2020

main subject

1 reference

2

1 reference

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Atahualpa Castillo-Morales

12 March 2020

4

1 reference

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12 March 2020

Araxi O. Urrutia

5

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12 March 2020

author name string

Lu Chen

1

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12 March 2020

Jaime M Tovar-Corona

3

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12 March 2020

publication date

27 March 2014

1 reference

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Molecular Biology and Evolution

12 March 2020

published in

1 reference

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12 March 2020

volume

31

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12 March 2020

issue

6

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12 March 2020

page(s)

1402-1413

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Evolution and quantitative comparison of genome-wide protein domain distributions

12 March 2020

cites work

1 reference

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Alternative splicing: a potential source of functional innovation in the eukaryotic genome

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The relationship between proteome size, structural disorder and organism complexity

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The plausible reason why the length of 5' untranslated region is unrelated to organismal complexity

14 July 2018

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Coding potential of the products of alternative splicing in human

14 July 2018

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Noisy splicing drives mRNA isoform diversity in human cells.

14 July 2018

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Did genetic drift drive increases in genome complexity?

14 July 2018

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Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity

14 July 2018

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Unconstrained mining of transcript data reveals increased alternative splicing complexity in the human transcriptome.

14 July 2018

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Projection of gene-protein networks to the functional space of the proteome and its application to analysis of organism complexity

14 July 2018

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Expansion of the eukaryotic proteome by alternative splicing

14 July 2018

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Comprehensive splicing graph analysis of alternative splicing patterns in chicken, compared to human and mouse

14 July 2018

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Early origin of the bilaterian developmental toolkit

14 July 2018

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Global prediction of tissue-specific gene expression and context-dependent gene networks in Caenorhabditis elegans

14 July 2018

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The consequences of genetic drift for bacterial genome complexity

14 July 2018

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

14 July 2018

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Alternative isoform regulation in human tissue transcriptomes

14 July 2018

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Low conservation and species-specific evolution of alternative splicing in humans and mice: comparative genomics analysis using well-annotated full-length cDNAs

14 July 2018

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The unfoldomics decade: an update on intrinsically disordered proteins.

14 July 2018

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Splice-mediated Variants of Proteins (SpliVaP) - data and characterization of changes in signatures among protein isoforms due to alternative splicing

14 July 2018

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Impacts of protein-protein interaction domains on organism and network complexity

14 July 2018

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The amphioxus genome and the evolution of the chordate karyotype

14 July 2018

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Relating alternative splicing to proteome complexity and genome evolution.

14 July 2018

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Evolution of protein domain promiscuity in eukaryotes

14 July 2018

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Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements

14 July 2018

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14 July 2018

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Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals

14 July 2018

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The frailty of adaptive hypotheses for the origins of organismal complexity

14 July 2018

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Quantifying organismal complexity using a population genetic approach

14 July 2018

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Different levels of alternative splicing among eukaryotes

14 July 2018

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14 July 2018

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Human cell type diversity, evolution, development, and classification with special reference to cells derived from the neural crest

14 July 2018

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Protein family expansions and biological complexity

14 July 2018

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Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms

14 July 2018

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Tunicates and not cephalochordates are the closest living relatives of vertebrates

14 July 2018

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Two rounds of whole genome duplication in the ancestral vertebrate

14 July 2018

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A gene expression map of Arabidopsis thaliana development

14 July 2018

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GMAP: a genomic mapping and alignment program for mRNA and EST sequences

14 July 2018

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Evidence for widespread degradation of gene control regions in hominid genomes

14 July 2018

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A gene atlas of the mouse and human protein-encoding transcriptomes

14 July 2018

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A molecular timescale of eukaryote evolution and the rise of complex multicellular life

14 July 2018

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How prevalent is functional alternative splicing in the human genome?

14 July 2018

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The origins of genome complexity

14 July 2018

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Superpolynomial Growth in the Number of Attractors in Kauffman Networks

14 July 2018

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Increase of functional diversity by alternative splicing

14 July 2018

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14 July 2018

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Expansion of genome coding regions by acquisition of new genes

14 July 2018

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A question of size: the eukaryotic proteome and the problems in defining it.

14 July 2018

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Alternative splicing and genome complexity

14 July 2018

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Initial sequencing and analysis of the human genome

14 July 2018

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Alternative splicing: increasing diversity in the proteomic world

14 July 2018

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Inferring the historical patterns of biological evolution

14 July 2018

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14 July 2018

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Gene number, noise reduction and biological complexity

14 July 2018

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Metabolic stability and epigenesis in randomly constructed genetic nets

14 July 2018

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A new look at the statistical model identification

14 July 2018

1 reference

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Size and complexity among multicellular organisms

21 January 2018

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Assessing the impact of alternative splicing on domain interactions in the human proteome

21 January 2018

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Factors that contribute to variation in evolutionary rate among Arabidopsis genes

21 January 2018

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Phylogenies and the Comparative Method

21 January 2018

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Morphological complexity increase in metazoans

21 January 2018

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What If There Are Only 30,000 Human Genes?

21 January 2018

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How many genes in the human genome?

21 January 2018

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21 January 2018

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12 December 2020

Estimating rates of alternative splicing in mammals and invertebrates

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12 December 2020

Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life

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12 December 2020

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Mutation rate and the cost of complexity

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12 December 2020

On the dynamics of random Boolean networks subject to noise: Attractors, ergodic sets and cell types

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12 December 2020

Identifiers

DOI

10.1093/MOLBEV/MSU083

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24682283%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24682283%20AND%20SRC:MED&resulttype=core&format=json

12 March 2020

PubMed publication ID

24682283

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24682283%20AND%20SRC:MED&resulttype=core&format=json