A new strategy of RNA interference that targets heterologous sequences reveals CITFA1 as an essential component of class I transcription factor A in Trypanosoma brucei. (Q33743574)

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English	A new strategy of RNA interference that targets heterologous sequences reveals CITFA1 as an essential component of class I transcription factor A in Trypanosoma brucei.	scientific article

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scholarly article

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14 March 2020

A new strategy of RNA interference that targets heterologous sequences reveals CITFA1 as an essential component of class I transcription factor A in Trypanosoma brucei (English)

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14 March 2020

Trypanosoma brucei

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RNA interference

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based on heuristic

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Justin K Kirkham

3

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14 March 2020

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Sung Hee Park

1

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14 March 2020

Bao N Nguyen

2

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14 March 2020

Tu N Nguyen

4

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14 March 2020

Arthur Günzl

5

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14 March 2020

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11 April 2014

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14 March 2020

Eukaryotic Cell

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14 March 2020

13

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14 March 2020

6

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14 March 2020

785-795

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14 March 2020

Promoter occupancy of the basal class I transcription factor A differs strongly between active and silent VSG expression sites in Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Strategies to construct null and conditional null Trypanosoma brucei mutants using Cre-recombinase and loxP.

1 reference

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28 July 2018

Trypanosome cdc2-related kinase 9 controls spliced leader RNA cap4 methylation and phosphorylation of RNA polymerase II subunit RPB1

1 reference

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28 July 2018

MCM-BP is required for repression of life-cycle specific genes transcribed by RNA polymerase I in the mammalian infectious form of Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Characterization of a novel class I transcription factor A (CITFA) subunit that is indispensable for transcription by the multifunctional RNA polymerase I of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

A new generation of T7 RNA polymerase-independent inducible expression plasmids for Trypanosoma brucei

1 reference

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28 July 2018

The trypanosomatid-specific N terminus of RPA2 is required for RNA polymerase I assembly, localization, and function

1 reference

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28 July 2018

Transcription by the multifunctional RNA polymerase I in Trypanosoma brucei functions independently of RPB7.

1 reference

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28 July 2018

RNA interference in protozoan parasites: achievements and challenges

1 reference

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28 July 2018

A Gateway® compatible vector for gene silencing in bloodstream form Trypanosoma brucei

1 reference

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28 July 2018

A TFIIH-associated mediator head is a basal factor of small nuclear spliced leader RNA gene transcription in early-diverged trypanosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

The pre-mRNA splicing machinery of trypanosomes: complex or simplified?

1 reference

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28 July 2018

A protein-protein interaction map of the Trypanosoma brucei paraflagellar rod.

1 reference

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28 July 2018

Spliceosomal proteomics in Trypanosoma brucei reveal new RNA splicing factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Telomeric expression sites are highly conserved in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Identification of a novel chromosomal passenger complex and its unique localization during cytokinesis in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Multifunctional class I transcription in Trypanosoma brucei depends on a novel protein complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Active RNA polymerase I of Trypanosoma brucei harbors a novel subunit essential for transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Highly efficient tandem affinity purification of trypanosome protein complexes based on a novel epitope combination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Characterization of a multisubunit transcription factor complex essential for spliced-leader RNA gene transcription in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

RNA polymerase I transcribes procyclin genes and variant surface glycoprotein gene expression sites in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Unique features of the Trypanosoma cruzi U2AF35 splicing factor☆

1 reference

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28 July 2018

Glycolysis modulates trypanosome glycoprotein expression as revealed by an RNAi library

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Flagellum ontogeny in trypanosomes studied via an inherited and regulated RNA interference system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Genetic interference in Trypanosoma brucei by heritable and inducible double-stranded RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

A generic protein purification method for protein complex characterization and proteome exploration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Double-stranded RNA induces mRNA degradation in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

The PARP promoter of Trypanosoma brucei is developmentally regulated in a chromosomal context.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

The trans-spliceosomal U2 snRNP protein 40K of Trypanosoma brucei: cloning and analysis of functional domains reveals homology to a mammalian snRNP protein

1 reference

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28 July 2018

Domain Structure of U2 and U4/U6 Small Nuclear Ribonucleoprotein Particles from Trypanosoma brucei: Identification of trans-Spliceosomal Specific RNA-Protein Interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

28 July 2018

Functional characterization and protein-protein interactions of trypanosome splicing factors U2AF35, U2AF65 and SF1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

A TFIIB-like protein is indispensable for spliced leader RNA gene transcription in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

Tagging a T. brucei RRNA locus improves stable transfection efficiency and circumvents inducible expression position effects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

The 14-3-3 proteins of Trypanosoma brucei function in motility, cytokinesis, and cell cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

A doubly inducible system for RNA interference and rapid RNAi plasmid construction in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

A PCR-based method for gene deletion and protein tagging in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

In vivo analysis of the RNA interference mechanism in Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

Targeting of a tetracycline-inducible expression system to the transcriptionally silent minichromosomes of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4054280

30 October 2018

Subnuclear localization of the active variant surface glycoprotein gene expression site in Trypanosoma brucei.

1 reference

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30 October 2018

Inducible gene expression in trypanosomes mediated by a prokaryotic repressor.

1 reference

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30 October 2018

A pol I transcriptional body associated with VSG mono-allelic expression in Trypanosoma brucei

1 reference

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10 December 2018

Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/24728195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The composition of untranslated regions in Trypanosoma cruzi genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/24728195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The interaction of a Ca2+-dependent monoclonal antibody with the protein C activation peptide region. Evidence for obligatory Ca2+ binding to both antigen and antibody

1 reference

https://pubmed.ncbi.nlm.nih.gov/24728195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Double-stranded RNA interference in Trypanosoma brucei using head-to-head promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/24728195

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1128/EC.00014-14

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Europe PubMed Central

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14 March 2020

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14 March 2020

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24728195%20AND%20SRC:MED&resulttype=core&format=json

14 March 2020

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