Periodic variation in side-chain polarities of T-cell antigenic peptides correlates with their structure and activity (Q33973345)

30 July 2017

title

Periodic variation in side-chain polarities of T-cell antigenic peptides correlates with their structure and activity (English)

1 reference

30 July 2017

2

H. Margalit

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

1 August 2024

author name string

J. L. Cornette

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

1 August 2024

J. A. Berzofsky

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

1 August 2024

C. DeLisi

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

1 August 2024

language of work or name

English

0 references

publication date

1 August 1995

1 reference

30 July 2017

29 August 1995

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=7667297

full work available at URL

1 August 2024

https://europepmc.org/articles/pmc41158?pdf=render

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

https://europepmc.org/articles/PMC41158

1 August 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

https://europepmc.org/articles/PMC41158?pdf=render

1 August 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A7667297

https://pnas.org/doi/pdf/10.1073/pnas.92.18.8368

1 August 2024

1 reference

Crossref

DOI

10.1073/PNAS.92.18.8368

https://api.crossref.org/works/10.1073/PNAS.92.18.8368

Proceedings of the National Academy of Sciences of the United States of America

1 August 2024

published in

1 reference

30 July 2017

volume

92

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30 July 2017

issue

18

1 reference

30 July 2017

page(s)

8368-8372

1 reference

Sequence features that correlate with MHC restriction

30 July 2017

cites work

1 reference

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H-2Dd exploits a four residue peptide binding motif

5 July 2018

1 reference

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Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide

5 July 2018

1 reference

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MHC ligands and peptide motifs: first listing

5 July 2018

1 reference

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The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2

5 July 2018

1 reference

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The hydrophobic moment detects periodicity in protein hydrophobicity

5 July 2018

1 reference

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Hydrophobicity scales and computational techniques for detecting amphipathic structures in proteins

5 July 2018

1 reference

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Hydrophobic strip-of-helix algorithm for selection of T cell-presented peptides

5 July 2018

1 reference

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Prediction of major histocompatibility complex binding regions of protein antigens by sequence pattern analysis

5 July 2018

1 reference

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Immunodominant sites of human T cell lymphotropic virus type 1 envelope protein for murine helper T cells

5 July 2018

1 reference

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An immunodominant epitope of the human immunodeficiency virus envelope glycoprotein gp160 recognized by class I major histocompatibility complex molecule-restricted murine cytotoxic T lymphocytes.

5 July 2018

1 reference

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A sequence pattern common to T cell epitopes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=41158

Mapping of T cell epitopes using recombinant antigens and synthetic peptides

5 July 2018

1 reference

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Helper T-cell antigenic site identification in the acquired immunodeficiency syndrome virus gp120 envelope protein and induction of immunity in mice to the native protein using a 16-residue synthetic peptide

5 July 2018

1 reference

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Use of synthetic peptides of influenza nucleoprotein to define epitopes recognized by class I-restricted cytotoxic T lymphocytes

5 July 2018

1 reference

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Cytotoxic T lymphocytes recognize a fragment of influenza virus matrix protein in association with HLA-A2.

5 July 2018

1 reference

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Prediction of immunodominant helper T cell antigenic sites from the primary sequence

5 July 2018

1 reference

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Construction of synthetic immunogen: use of new T-helper epitope on malaria circumsporozoite protein

5 July 2018

1 reference

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Strong conformational propensities enhance T cell antigenicity.

5 July 2018

1 reference

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T-cell antigenic sites tend to be amphipathic structures

5 July 2018

1 reference

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Comparison of structural requirements for interaction of the same peptide with I-Ek and I-Ed molecules in the activation of MHC class II-restricted T cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=41158

Atomic structure of a human MHC molecule presenting an influenza virus peptide

5 July 2018

1 reference

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Crystal structure of the major histocompatibility complex class I H-2Kb molecule containing a single viral peptide: implications for peptide binding and T-cell receptor recognition

5 July 2018

1 reference

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Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb

5 July 2018

1 reference

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Selection of representative protein data sets

5 July 2018

1 reference

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The Protein Data Bank: a computer-based archival file for macromolecular structures

5 July 2018

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Left-handed polyproline II helices commonly occur in globular proteins.

5 July 2018

1 reference

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Two novel T cell epitope prediction algorithms based on MHC-binding motifs; comparison of predicted and published epitopes from Mycobacterium tuberculosis and HIV protein sequences.

29 October 2018

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T-cell epitope of the autoantigen myelin basic protein that induces encephalomyelitis

29 October 2018

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12 December 2020

Comparison of three related methods to select T cell-presented sequences of protein antigens

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12 December 2020

The structure of HLA-B27 reveals nonamer self-peptides bound in an extended conformation

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12 December 2020

The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC

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12 December 2020

Identifiers

DOI

10.1073/PNAS.92.18.8368

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference