Are the duplication cost and Robinson-Foulds distance equivalent? (Q33974895)

30 July 2017

title

Are the duplication cost and Robinson-Foulds distance equivalent? (English)

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30 July 2017

Yu Zheng

1

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30 July 2017

Louxin Zhang

series ordinal

2

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30 July 2017

publication date

2 July 2014

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Journal of Computational Biology

30 July 2017

published in

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30 July 2017

volume

21

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30 July 2017

issue

8

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30 July 2017

page(s)

578-590

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Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

30 July 2017

cites work

1 reference

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5 July 2018

1 reference

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Turning the crown upside down: gene tree parsimony roots the eukaryotic tree of life.

5 July 2018

1 reference

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Fast and accurate methods for phylogenomic analyses

5 July 2018

1 reference

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Algorithms for MDC-based multi-locus phylogeny inference: beyond rooted binary gene trees on single alleles

5 July 2018

1 reference

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Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees

5 July 2018

1 reference

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Species tree inference by minimizing deep coalescences

5 July 2018

1 reference

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DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony

5 July 2018

1 reference

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Broad phylogenomic sampling improves resolution of the animal tree of life

5 July 2018

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Species trees from gene trees: reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions

5 July 2018

1 reference

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Inferring angiosperm phylogeny from EST data with widespread gene duplication

5 July 2018

1 reference

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Distinguishing Homologous from Analogous Proteins

5 July 2018

1 reference

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Relationships between gene trees and species trees

5 July 2018

1 reference

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Maximizing Deep Coalescence Cost

5 July 2018

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Exact solutions for species tree inference from discordant gene trees.

29 October 2018

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Mathematical properties of the deep coalescence cost.

29 October 2018

1 reference

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Inferring optimal species trees under gene duplication and loss

29 October 2018

1 reference

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Terraces in phylogenetic tree space

29 October 2018

1 reference

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From gene trees to species trees II: species tree inference by minimizing deep coalescence events.

29 October 2018

1 reference

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Linear-time algorithms for the multiple gene duplication problems.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4116105

The gene-duplication problem: near-linear time algorithms for NNI-based local searches.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4116105

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4116105

Bayesian estimation of concordance among gene trees.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4116105

29 October 2018

Identifiers

DOI

10.1089/CMB.2014.0021

1 reference

30 July 2017

DBLP publication ID

journals/jcb/ZhengZ14

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DBLP Dataset 2021-01-02

28 January 2021

1 reference

30 July 2017

1 reference