Matapax: an online high-throughput genome-wide association study pipeline. (Q34165660)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

title

Matapax: an online high-throughput genome-wide association study pipeline (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

genome-wide association study

23 January 2020

main subject

0 references

author

Dirk Walther

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

author name string

Liam H Childs

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

Jan Lisec

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

language of work or name

English

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publication date

21 February 2012

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

number of pages

8

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based on heuristic

inferred from page(s)

published in

Plant Physiology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

volume

158

1 reference

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23 January 2020

issue

4

1 reference

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23 January 2020

page(s)

1534-1541

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

23 January 2020

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

genome-wide association study

1 reference

based on heuristic

inferred from title

cites work

GAPIT: genome association and prediction integrated tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel

28 October 2018

1 reference

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Whole-genome sequencing of multiple Arabidopsis thaliana populations.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Genome-wide association studies pipeline (GWASpi): a desktop application for genome-wide SNP analysis and management

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

High-throughput phenotyping of multicellular organisms: finding the link between genotype and phenotype

28 October 2018

1 reference

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Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana.

28 October 2018

1 reference

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Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

The 1001 genomes project for Arabidopsis thaliana

28 October 2018

1 reference

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Sequencing of natural strains of Arabidopsis thaliana with short reads

28 October 2018

1 reference

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Efficient control of population structure in model organism association mapping

28 October 2018

1 reference

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Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

PLINK: a tool set for whole-genome association and population-based linkage analyses

28 October 2018

1 reference

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Recombination and linkage disequilibrium in Arabidopsis thaliana.

28 October 2018

1 reference

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TASSEL: software for association mapping of complex traits in diverse samples

28 October 2018

1 reference

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Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

28 October 2018

1 reference

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GenABEL: an R library for genome-wide association analysis

28 October 2018

1 reference

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A genome-wide association study identifies novel risk loci for type 2 diabetes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

An Arabidopsis example of association mapping in structured samples

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Complement factor H polymorphism in age-related macular degeneration

28 October 2018

1 reference

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The International HapMap Project

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

Gas chromatography mass spectrometry–based metabolite profiling in plants

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3343729

28 October 2018

Identifiers

DOI

10.1104/PP.112.194027

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json

23 January 2020

PMC publication ID

3343729

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22353578%20AND%20SRC:MED&resulttype=core&format=json