Strain prioritization for natural product discovery by a high-throughput real-time PCR method. (Q34400070)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25238028%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

review article

1 reference

title

Strain prioritization for natural product discovery by a high-throughput real-time PCR method (English)

1 reference

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16 February 2020

1 reference

1 reference

1

1 reference

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16 February 2020

Dong Yang

3

1 reference

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16 February 2020

Jeffrey D. Rudolf

4

1 reference

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16 February 2020

Jeremy R. Lohman

8

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16 February 2020

Xiangcheng Zhu

9

1 reference

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16 February 2020

author name string

Tingting Huang

2

1 reference

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16 February 2020

Pengfei Xie

5

1 reference

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16 February 2020

Guangbo Xie

6

1 reference

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16 February 2020

Qihui Teng

7

1 reference

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16 February 2020

Yong Huang

10

1 reference

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16 February 2020

Li-Xing Zhao

11

1 reference

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16 February 2020

Yi Jiang

12

1 reference

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16 February 2020

Yanwen Duan

13

1 reference

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16 February 2020

Ben Shen

14

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16 February 2020

publication date

19 September 2014

1 reference

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Journal of Natural Products

16 February 2020

published in

1 reference

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16 February 2020

volume

77

1 reference

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16 February 2020

issue

10

1 reference

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16 February 2020

page(s)

2296-2303

1 reference

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Biosynthetic potential-based strain prioritization for natural product discovery: a showcase for diterpenoid-producing actinomycetes

16 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Structure-based gene targeting discovery of sphaerimicin, a bacterial translocase I inhibitor

6 July 2018

1 reference

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Mapping gene clusters within arrayed metagenomic libraries to expand the structural diversity of biomedically relevant natural products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Bacterial diterpene synthases: new opportunities for mechanistic enzymology and engineered biosynthesis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Natural products as sources of new drugs over the 30 years from 1981 to 2010

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Dedicated ent-kaurene and ent-atiserene synthases for platensimycin and platencin biosynthesis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Multilocus sequence analysis of phytopathogenic species of the genus Streptomyces

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Current approaches to exploit actinomycetes as a source of novel natural products.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Engineering of Streptomyces platensis MA7339 for overproduction of platencin and congeners.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Natural products version 2.0: connecting genes to molecules.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Drug discovery and natural products: end of an era or an endless frontier?

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Engineered Streptomyces platensis strains that overproduce antibiotics platensimycin and platencin.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Twenty-five years of quantitative PCR for gene expression analysis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

A multilocus phylogeny of the Streptomyces griseus 16S rRNA gene clade: use of multilocus sequence analysis for streptomycete systematics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Discovery of platencin, a dual FabF and FabH inhibitor with in vivo antibiotic properties

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

OligoCalc: an online oligonucleotide properties calculator.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Functional analysis of eubacterial ent-copalyl diphosphate synthase and pimara-9(11),15-diene synthase with unique primary sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Microplate fluorescence assay for the quantification of double stranded DNA using SYBR Green I dye.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Platensimycin is a selective FabF inhibitor with potent antibiotic properties

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Discovery of FabH/FabF inhibitors from natural products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

The power of real-time PCR.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Real‐Time Polymerase Chain Reaction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Improved thermodynamic parameters and helix initiation factor to predict stability of DNA duplexes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Predicting DNA duplex stability from the base sequence

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

DNA probes: applications of the principles of nucleic acid hybridization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4208669

Isolation, Structure, and Absolute Stereochemistry of Platensimycin, A Broad Spectrum Antibiotic Discovered Using an Antisense Differential Sensitivity Strategy

6 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25238028

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Isolation and Structure of Platencin: A FabH and FabF Dual Inhibitor with Potent Broad-Spectrum Antibiotic Activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25238028

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/NP5006168

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25238028%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25238028%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

PubMed publication ID

25238028

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25238028%20AND%20SRC:MED&resulttype=core&format=json