MMpred: functional miRNA--mRNA interaction analyses by miRNA expression prediction (Q34476577)

2 August 2017

title

MMpred: functional miRNA--mRNA interaction analyses by miRNA expression prediction (English)

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2 August 2017

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Przemyslaw A Stempor

1

1 reference

2 August 2017

Michael Cauchi

series ordinal

2

1 reference

2 August 2017

Paul Wilson

series ordinal

3

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2 August 2017

language of work or name

English

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publication date

14 November 2012

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2 August 2017

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2 August 2017

volume

13

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2 August 2017

page(s)

620

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Impact of host genes and strand selection on miRNA and miRNA* expression.

2 August 2017

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6 July 2018

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6 July 2018

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6 July 2018

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Intronic microRNAs support their host genes by mediating synergistic and antagonistic regulatory effects

6 July 2018

1 reference

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Performance evaluation of commercial miRNA expression array platforms

6 July 2018

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Processing of Agilent microRNA array data

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Pediatric primary central nervous system germ cell tumors of different prognosis groups show characteristic miRNome traits and chromosome copy number variations

6 July 2018

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Insight into microRNA regulation by analyzing the characteristics of their targets in humans

6 July 2018

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Non-coding RNAs: regulators of disease

6 July 2018

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Conserved expression patterns predict microRNA targets

6 July 2018

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MicroRNA-208a is a regulator of cardiac hypertrophy and conduction in mice.

6 July 2018

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A genomic score prognostic of outcome in trauma patients

6 July 2018

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Features of mammalian microRNA promoters emerge from polymerase II chromatin immunoprecipitation data

6 July 2018

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MicroRNA in autoimmunity and autoimmune diseases.

6 July 2018

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A MicroRNA gene is hosted in an intron of a schizophrenia-susceptibility gene.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

MicroRNA target prediction by expression analysis of host genes

6 July 2018

1 reference

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miRecords: an integrated resource for microRNA-target interactions

6 July 2018

1 reference

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An intronic microRNA silences genes that are functionally antagonistic to its host gene

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Using expression profiling data to identify human microRNA targets

6 July 2018

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miRBase: tools for microRNA genomics

6 July 2018

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The role of site accessibility in microRNA target recognition

6 July 2018

1 reference

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MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals

6 July 2018

1 reference

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Exon arrays provide accurate assessments of gene expression

6 July 2018

1 reference

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High correspondence between Affymetrix exon and standard expression arrays.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Processing of intronic microRNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Post-transcriptional regulation of the let-7 microRNA during neural cell specification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

The widespread impact of mammalian MicroRNAs on mRNA repression and evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Post-transcriptional gene silencing by siRNAs and miRNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Identification of mammalian microRNA host genes and transcription units

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

MicroRNA targets in Drosophila

6 July 2018

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MicroRNAs modulate hematopoietic lineage differentiation

6 July 2018

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Summaries of Affymetrix GeneChip probe level data

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

OligoHeatMap (OHM): an online tool to estimate and display hybridizations of oligonucleotides onto DNA sequences

6 July 2018

1 reference

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The relationship between non-protein-coding DNA and eukaryotic complexity.

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-13-620

A comparison of Affymetrix gene expression arrays

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-13-620

Potent effect of target structure on microRNA function.

21 January 2018

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https://api.crossref.org/works/10.1186%2F1471-2164-13-620

CD40 ligation restores type 1 polarizing capacity in TLR4-activated dendritic cells that have ceased interleukin-12 expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-620

Impact of normalization on miRNA microarray expression profiling

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Genetics. Small RNAs reveal an activating side.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3562514

Affymetrix Whole-Transcript Human Gene 1.0 ST array is highly concordant with standard 3' expression arrays

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23151045

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-620

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

1 reference