Synergies between RNA degradation and trans-translation in Streptococcus pneumoniae: cross regulation and co-transcription of RNase R and SmpB. (Q34483390)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	Synergies between RNA degradation and trans-translation in Streptococcus pneumoniae: cross regulation and co-transcription of RNase R and SmpB.	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Synergies between RNA degradation and trans-translation in Streptococcus pneumoniae: cross regulation and co-transcription of RNase R and SmpB. (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Streptococcus pneumoniae

1 reference

based on heuristic

inferred from title

Ricardo Neves Moreira

object named as

Ricardo N Moreira

1

0 references

object named as

Mónica Amblar

4

0 references

Susana Domingues

object named as

Susana Domingues

2

0 references

Sandra Cristina Viegas

object named as

Sandra C Viegas

3

0 references

Cecília Maria Arraiano

object named as

Cecília M Arraiano

5

0 references

publication date

20 November 2012

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

BMC Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

12

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

268

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

describes a project that uses

object named as

ImageQuant

2 references

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3534368/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Francisella tularensis tmRNA system mutants are vulnerable to stress, avirulent in mice, and provide effective immune protection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Acetylation regulates the stability of a bacterial protein: growth stage-dependent modification of RNase R.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Importance and key events of prokaryotic RNA decay: the ultimate fate of an RNA molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The tmRNA-tagging mechanism and the control of gene expression: a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The N-terminus of GalE induces tmRNA activity in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Non‐stop mRNA decay initiates at the ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The Sec translocase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

A novel mechanism for ribonuclease regulation: transfer-messenger RNA (tmRNA) and its associated protein SmpB regulate the stability of RNase R.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The critical role of RNA processing and degradation in the control of gene expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Beyond ribosome rescue: tmRNA and co-translational processes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Subcellular localization of a bacterial regulatory RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Effects of antibiotics and a proto-oncogene homolog on destruction of protein translocator SecY.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The 3'-to-5' exoribonuclease (encoded by HP1248) of Helicobacter pylori regulates motility and apoptosis-inducing genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The role of 3'-5' exoribonucleases in RNA degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The poly(A)-dependent degradation pathway of rpsO mRNA is primarily mediated by RNase R.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Loss of RNase R induces competence development in Legionella pneumophila.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Genomic analysis of the role of RNase R in the turnover of Pseudomonas putida mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Biology of trans-translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Cold shock exoribonuclease R (VacB) is involved in Aeromonas hydrophila pathogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Quality control of bacterial mRNA decoding and decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Protein translocation across the bacterial cytoplasmic membrane.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Characterization of the role of ribonucleases in Salmonella small RNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Bacterial protein secretion through the translocase nanomachine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Exoribonuclease R in Mycoplasma genitalium can carry out both RNA processing and degradative functions and is sensitive to RNA ribose methylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Physiology of tmRNA: what gets tagged and why?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Functional genomics of stress response in Pseudomonas putida KT2440.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Helical distribution of the bacterial chemoreceptor via colocalization with the Sec protein translocation machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Identification of essential genes in Streptococcus pneumoniae by allelic replacement mutagenesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Cell cycle-regulated degradation of tmRNA is controlled by RNase R and SmpB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Participation of 3'-to-5' exoribonucleases in the turnover of Bacillus subtilis mRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

An important role for RNase R in mRNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Subcellular sites for bacterial protein export

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Quality control of ribosomal RNA mediated by polynucleotide phosphorylase and RNase R

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

The phylogenetic distribution of bacterial ribonucleases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

An rpsL cassette, janus, for gene replacement through negative selection in Streptococcus pneumoniae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Complete Genome Sequence of a Virulent Isolate of Streptococcus pneumoniae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Novel small RNA-encoding genes in the intergenic regions of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Protein factors associated with the SsrA.SmpB tagging and ribosome rescue complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

E. coli host strains significantly affect the quality of small scale plasmid DNA preparations used for sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

vacB, a novel chromosomal gene required for expression of virulence genes on the large plasmid of Shigella flexneri

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

6 July 2018

Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

RNase R affects gene expression in stationary phase: regulation of ompA.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

Cold shock induction of RNase R and its role in the maturation of the quality control mediator SsrA/tmRNA.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

Elevation of RNase R in response to multiple stress conditions

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

The vacB gene required for virulence in Shigella flexneri and Escherichia coli encodes the exoribonuclease RNase R.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

RNase R degrades non-stop mRNAs selectively in an SmpB-tmRNA-dependent manner.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

Biochemical characterization of the RNase II family of exoribonucleases from the human pathogens Salmonella typhimurium and Streptococcus pneumoniae

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

Modification of tricine-SDS-PAGE for online and offline analysis of phosphoproteins by ICP-MS.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome

1 reference

https://api.crossref.org/works/10.1186%2F1471-2180-12-268

21 January 2018

RNase II levels change according to the growth conditions: characterization of gmr, a new Escherichia coli gene involved in the modulation of RNase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3534368

27 October 2018

Expression of green fluorescent protein in Lactococcus lactis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Post-transcriptional control of gene expression: effectors of mRNA decay

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Construction of a vector plasmid family and its use for molecular cloning in Streptococcus lactis

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNase II structure completes group portrait of 3' exoribonucleases

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exoribonuclease R in Pseudomonas syringae is essential for growth at low temperature and plays a novel role in the 3' end processing of 16 and 5 S ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of tRNA(Cys) processing in a conditional Bacillus subtilis CCase mutant reveals the participation of RNase R in its quality control

1 reference

https://pubmed.ncbi.nlm.nih.gov/23167513

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2180-12-268

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34483390&oldid=2196691868"