Progress on the HUPO Draft Human Proteome: 2017 Metrics of the Human Proteome Project. (Q38602346)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28853897%20AND%20SRC:MED&resulttype=core&format=json

28 March 2020

title

Progress on the HUPO Draft Human Proteome: 2017 Metrics of the Human Proteome Project (English)

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28 March 2020

5

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28 March 2020

Gil Omenn

1

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28 March 2020

Lydie Lane

2

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28 March 2020

author name string

Emma K Lundberg

3

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28 March 2020

Christopher M Overall

4

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28 March 2020

publication date

9 October 2017

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Journal of Proteome Research

28 March 2020

published in

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28 March 2020

volume

16

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28 March 2020

issue

12

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28 March 2020

page(s)

4281-4287

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Noncoding after All: Biases in Proteomics Data Do Not Explain Observed Absence of lncRNA Translation Products

28 March 2020

cites work

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25 June 2018

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25 June 2018

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Deep Coverage Proteomics Identifies More Low-Abundance Missing Proteins in Human Testis Tissue with Q-Exactive HF Mass Spectrometer.

25 June 2018

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25 June 2018

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Metrics for the Human Proteome Project 2016: Progress on Identifying and Characterizing the Human Proteome, Including Post-Translational Modifications

25 June 2018

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Missing protein landscape of human chromosomes 2 and 14: Progress and current status

25 June 2018

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Human SRMAtlas: A Resource of Targeted Assays to Quantify the Complete Human Proteome

25 June 2018

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Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

25 June 2018

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Data-Driven Approach To Determine Popular Proteins for Targeted Proteomics Translation of Six Organ Systems

25 June 2018

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Six alternative proteases for mass spectrometry-based proteomics beyond trypsin.

25 June 2018

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Asprosin, a Fasting-Induced Glucogenic Protein Hormone

25 June 2018

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A Network of Splice Isoforms for the Mouse

25 June 2018

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Transcriptomics resources of human tissues and organs

25 June 2018

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A proteogenomic approach to understand splice isoform functions through sequence and expression-based computational modeling

25 June 2018

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Detecting actively translated open reading frames in ribosome profiling data

25 June 2018

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Insights from ENCODE on Missing Proteins: Why β-Defensin Expression Is Scarcely Detected.

25 June 2018

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Metrics for the Human Proteome Project 2015: Progress on the Human Proteome and Guidelines for High-Confidence Protein Identification

25 June 2018

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State of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet

25 June 2018

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Building high-quality assay libraries for targeted analysis of SWATH MS data

25 June 2018

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Proteomics. Tissue-based map of the human proteome

25 June 2018

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25 June 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5872831

3 December 2018

https://pubmed.ncbi.nlm.nih.gov/28853897

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics

1 reference

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The landscape of long noncoding RNAs in the human transcriptome

25 June 2018

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An update on LNCipedia: a database for annotated human lncRNA sequences.

25 June 2018

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Proteogenomics: concepts, applications and computational strategies

25 June 2018

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Metrics for the Human Proteome Project 2013-2014 and strategies for finding missing proteins

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5872831

Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins

25 June 2018

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Translating mRNAs strongly correlate to proteins in a multivariate manner and their translation ratios are phenotype specific.

25 June 2018

1 reference

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A chromosome-centric human proteome project (C-HPP) to characterize the sets of proteins encoded in chromosome 17.

25 June 2018

1 reference

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Peptidomic discovery of short open reading frame-encoded peptides in human cells.

25 June 2018

1 reference

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LNCipedia: a database for annotated human lncRNA transcript sequences and structures

25 June 2018

1 reference

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Modular regulatory principles of large non-coding RNAs

25 June 2018

1 reference

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The human proteome project: Current state and future direction.

25 June 2018

1 reference

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Creation of an antibody-based subcellular protein atlas

25 June 2018

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Skyline: an open source document editor for creating and analyzing targeted proteomics experiments

25 June 2018

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Diversity of translation start sites may define increased complexity of the human short ORFeome

25 June 2018

1 reference

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Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

25 June 2018

1 reference

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Can we predict protein from mRNA levels?

25 June 2018

1 reference

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31 August 2018

1 reference

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31 August 2018

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31 August 2018

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An update on LNCipedia: a database for annotated human lncRNA sequences

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1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28853897

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/ACS.JPROTEOME.7B00375

1 reference

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28 March 2020

1 reference

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28 March 2020

PubMed publication ID

28853897

1 reference