Phylogenomics Controlling for Base Compositional Bias Reveals a Single Origin of Eusociality in Corbiculate Bees. (Q40312696)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26576851%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Phylogenomics Controlling for Base Compositional Bias Reveals a Single Origin of Eusociality in Corbiculate Bees (English)

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29 February 2020

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5

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29 February 2020

3

S Hollis Woodard

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29 February 2020

author name string

Jonathan Romiguier

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29 February 2020

Sydney A Cameron

2

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29 February 2020

Brielle J Fischman

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29 February 2020

Christophe J Praz

6

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29 February 2020

publication date

17 November 2015

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Molecular Biology and Evolution

29 February 2020

published in

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29 February 2020

volume

33

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issue

3

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29 February 2020

page(s)

670-678

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Phylogenetic utility of the major opsin in bees (Hymenoptera: Apoidea): a reassessment

29 February 2020

cites work

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

A depauperate immune repertoire precedes evolution of sociality in bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

A review of long-branch attraction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Addressing gene tree discordance and non-stationarity to resolve a multi-locus phylogeny of the flatfishes (Teleostei: Pleuronectiformes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Exceptionally high levels of recombination across the honey bee genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Efficient likelihood computations with nonreversible models of evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Multiple origins of advanced eusociality in bees inferred from mitochondrial DNA sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The major opsin gene is useful for inferring higher level phylogenetic relationships of the corbiculate bees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The antiquity and evolutionary history of social behavior in bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Comprehensive phylogeny of apid bees reveals the evolutionary origins and antiquity of cleptoparasitism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The impact of molecular data on our understanding of bee phylogeny and evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Gene tree discordance, phylogenetic inference and the multispecies coalescent

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The impact of recombination on nucleotide substitutions in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Modeling compositional heterogeneity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Compositional bias may affect both DNA-based and protein-based phylogenetic reconstructions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Adaptation or biased gene conversion? Extending the null hypothesis of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

GC-biased gene conversion promotes the fixation of deleterious amino acid changes in primates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Phylogenetic analysis at deep timescales: unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The bee tree of life: a supermatrix approach to apoid phylogeny and biogeography

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Whole-genome analyses resolve early branches in the tree of life of modern birds

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Heterogeneity in regional GC content and differential usage of codons and amino acids in GC-poor and GC-rich regions of the genome of Apis mellifera

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Recombination is associated with the evolution of genome structure and worker behavior in honey bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Comparative methods offer powerful insights into social evolution in bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Estimating phylogenetic trees from genome-scale data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The major opsin in bees (Insecta: Hymenoptera): A promising nuclear gene for higher level phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Recombination explains isochores in mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Dynamic evolution of base composition: causes and consequences in avian phylogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Meiotic recombination favors the spreading of deleterious mutations in human populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Evolution of linear mitochondrial genomes in medusozoan cnidarians

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

SuperTriplets: a triplet-based supertree approach to phylogenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Genomic correlates of recombination rate and its variability across eight recombination maps in the western honey bee (Apis mellifera L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Patterns of positive selection in seven ant genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Nucleotide bias causes a genomewide bias in the amino acid composition of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Extreme recombination frequencies shape genome variation and evolution in the honeybee, Apis mellifera

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Dynamic regulation of genome-wide pre-mRNA splicing and stress tolerance by the Sm-like protein LSm5 in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Variation in genomic recombination rates among animal taxa and the case of social insects

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258

Genes involved in convergent evolution of eusociality in bees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSV258