Components of variance in transcriptomics based on electrophoretic separation of cDNA fragments (cDNA-AFLP). (Q42705692)

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2 February 2020

title

Components of variance in transcriptomics based on electrophoretic separation of cDNA fragments (cDNA-AFLP) (English)

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2 February 2020

0 references

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2

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2 February 2020

author name string

Arne Weiberg

series ordinal

1

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2 February 2020

publication date

1 July 2009

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2 February 2020

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2 February 2020

volume

30

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issue

14

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2 February 2020

page(s)

2549-2557

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PreP+07: improvements of a user friendly tool to preprocess and analyse microarray data

2 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Improved coverage of cDNA-AFLP by sequential digestion of immobilized cDNA

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

GOGOT: a method for the identification of differentially expressed fragments from cDNA-AFLP data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Conversion of cDNA differential display results (DDRT-PCR) into quantitative transcription profiles

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Whole-genome expression profiling through fragment display and combinatorial gene identification

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Sequence tag analysis of gene expression during pathogenic growth and microsclerotia development in the vascular wilt pathogen Verticillium dahliae

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

A decade of differential display

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Reproducibility of oligonucleotide microarray transcriptome analyses. An interlaboratory comparison using chemostat cultures of Saccharomyces cerevisiae.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

GenEST, a powerful bidirectional link between cDNA sequence data and gene expression profiles generated by cDNA-AFLP

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Serial analysis of gene expression

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Differential display of eukaryotic messenger RNA by means of the polymerase chain reaction

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

AFLP-based transcript profiling (cDNA-AFLP) for genome-wide expression analysis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Quantitative cDNA-AFLP analysis for genome-wide expression studies

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Automated detection of differently expressed fragments in mRNA differential display.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Simplified AFLP protocol: replacement of primer labeling by the incorporation of alpha-labeled nucleotides during PCR.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Gene expression analysis by transcript profiling coupled to a gene database query

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

Visualization of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2909398

AFLPinSilico, simulating AFLP fingerprints

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19588459

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Electrophoretic signal comparison applied to mRNA differential display analysis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19588459

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Statistical Challenges in Functional Genomics

1 reference

Crossref

https://api.crossref.org/works/10.1002%2FELPS.200800756

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1002/ELPS.200800756

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19588459%20AND%20SRC:MED&resulttype=core&format=json

2 February 2020

1 reference

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2 February 2020

PubMed publication ID

19588459

1 reference