An analysis of the impact of pre-analytical factors on the urine proteome: Sample processing time, temperature, and proteolysis (Q35423674)

8 August 2017

An analysis of the impact of pre-analytical factors on the urine proteome: Sample processing time, temperature, and proteolysis (English)

1 reference

Rosamonde Elizabeth Banks

8 August 2017

1 reference

10

object named as

Rosamonde E Banks

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David A. Cairns

2

object named as

David A Cairns

1 reference

8 August 2017

Matthew P Welberry Smith

object named as

Matthew Welberry Smith

8

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author name string

Sophie Hepburn

1

1 reference

8 August 2017

David Jackson

3

1 reference

8 August 2017

Rachel A Craven

4

1 reference

8 August 2017

Beverley Riley

5

1 reference

8 August 2017

Michelle Hutchinson

6

1 reference

8 August 2017

Steven Wood

7

1 reference

8 August 2017

Douglas Thompson

9

1 reference

8 August 2017

26 February 2015

1 reference

full work available at URL

8 August 2017

http://eprints.whiterose.ac.uk/92494/

content deliverer

White Rose Research Online

copyright license

Creative Commons Attribution

0 references

published in

Proteomics - Clinical Applications

1 reference

8 August 2017

9

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8 August 2017

5-6

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8 August 2017

507-521

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Urinary proteomics and molecular determinants of chronic kidney disease: possible link to proteases

8 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Multicentre prospective validation of a urinary peptidome-based classifier for the diagnosis of type 2 diabetic nephropathy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Correlation of serum and urinary matrix metalloproteases/tissue inhibitors of metalloproteases with subclinical allograft fibrosis in renal transplantation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine stability studies for novel biomarkers of acute kidney injury.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Technical aspects and inter-laboratory variability in native peptide profiling: the CE-MS experience

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Searching for new biomarkers of renal diseases through proteomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

A pilot study to investigate the potential of mass spectrometry profiling in the discovery of novel serum markers in chronic renal disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Biospecimen reporting for improved study quality (BRISQ)

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

A systematic analysis of the effects of increasing degrees of serum immunodepletion in terms of depth of coverage and other key aspects in top-down and bottom-up proteomic analyses

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Banking of clinical samples for proteomic biomarker studies: a consideration of logistical issues with a focus on pre-analytical variation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Sample handling for mass spectrometric proteomic investigations of human urine

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine proteomics for profiling of human disease using high accuracy mass spectrometry

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Chronic humoral rejection of human kidney allografts is associated with MMP-2 accumulation in podocytes and its release in the urine

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Naturally occurring human urinary peptides for use in diagnosis of chronic kidney disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Optimizing a proteomics platform for urine biomarker discovery

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine cytology and urine-based markers for bladder urothelial carcinoma detection and monitoring: developments and future prospects

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine collection and processing for protein biomarker discovery and quantification

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urinary proteases degrade albumin: implications for measurement of albuminuria in stored samples

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

CE-MS analysis of the human urinary proteome for biomarker discovery and disease diagnostics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Optimization of analytical and pre-analytical conditions for MALDI-TOF-MS human urine protein profiles

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine in clinical proteomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Optimizing sample handling for urinary proteomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Practical points in urinary proteomics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine profiling by SELDI-TOF/MS: monitoring of the critical steps in sample collection, handling and analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Standardized peptidome profiling of human urine by magnetic bead separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Discovery and validation of new protein biomarkers for urothelial cancer: a prospective analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Influences of blood sample processing on low-molecular-weight proteome identified by surface-enhanced laser desorption/ionization mass spectrometry

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Urine protein profiling with surface-enhanced laser-desorption/ionization time-of-flight mass spectrometry.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Freezing method affects the concentration and variability of urine proteins and the interpretation of data on microalbuminuria. The Oxford Regional Prospective Study Group

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4964914

Are protease inhibitors required for gel-based proteomics of kidney and urine?

12 July 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

Creatinine as the gold standard for kidney injury biomarker studies?

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

Artifactual isoform profile modification following treatment of human plasma or serum with protease inhibitor, monitored by 2-dimensional electrophoresis and mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

Urinary MMP-9/NGAL complex in children with acute cystitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

Diagnosis of subclinical and clinical acute T-cell-mediated rejection in renal transplant patients by urinary proteome analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

Protease profiling of different biofluids in type 1 diabetes mellitus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPRCA.201400079

The effect of storage pH on the precipitation of proteins in deep frozen urine samples

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25400092

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Toward a standardized urine proteome analysis methodology

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25400092

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1002/PRCA.201400079

1 reference

Dimensions Publication ID

8 August 2017

10.1002/PRCA.201400079

0 references

0 references

1 reference

8 August 2017

1 reference