Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction (Q39887706)

15 September 2017

Detecting Hidden Diversification Shifts in Models of Trait-Dependent Speciation and Extinction (English)

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15 September 2017

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Brian C O'Meara

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author name string

Jeremy M Beaulieu

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1

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15 September 2017

25 March 2016

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15 September 2017

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15 September 2017

65

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4

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15 September 2017

583-601

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Quantifying Age-dependent Extinction from Species Phylogenies

15 September 2017

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Fruit evolution and diversification in campanulid angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Modeling stabilizing selection: expanding the Ornstein-Uhlenbeck model of adaptive evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Extinction can be estimated from moderately sized molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Identifying hidden rate changes in the evolution of a binary morphological character: the evolution of plant habit in campanulid angiosperms

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Diversification of CYCLOIDEA-like genes in Dipsacaceae (Dipsacales): implications for the evolution of capitulum inflorescences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Exploring power and parameter estimation of the BiSSE method for analyzing species diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Confluence, synnovation, and depauperons in plant diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Phylogenies and the Comparative Method

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Diversitree : comparative phylogenetic analyses of diversification in R

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Estimating trait-dependent speciation and extinction rates from incompletely resolved phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

GEIGER: investigating evolutionary radiations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Bayesian phylogenetic model selection using reversible jump Markov chain Monte Carlo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Confounding asymmetries in evolutionary diversification and character change

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

The unsolved challenge to phylogenetic correlation tests for categorical characters

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Estimating a binary character's effect on speciation and extinction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Linking the investigations of character evolution and species diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Locating evolutionary precursors on a phylogenetic tree

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Reconciling molecular phylogenies with the fossil record

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Effect size, confidence interval and statistical significance: a practical guide for biologists

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Extinction rates can be estimated from molecular phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Null hypothesis significance testing: a review of an old and continuing controversy

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Tempo of trophic evolution and its impact on mammalian diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Extinction rates should not be estimated from molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Automatic detection of key innovations, rate shifts, and diversity-dependence on phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Model inadequacy and mistaken inferences of trait-dependent speciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Explosive evolutionary radiations: decreasing speciation or increasing extinction through time?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Diversity versus disparity and the radiation of modern cetaceans

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Rates of molecular evolution are linked to life history in flowering plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

treePL: divergence time estimation using penalized likelihood for large phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Temperate radiations and dying embers of a tropical past: the diversification of Viburnum

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Phylogeny and Phylogenetic Nomenclature of the Campanulidae based on an Expanded Sample of Genes and Taxa

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Defense mutualisms enhance plant diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Effects of gasteroid fruiting body morphology on diversification rates in three independent clades of fungi estimated using binary state speciation and extinction analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Genome Size Study in the Valerianaceae: First Results and New Hypotheses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

Fruits and Seeds of the Valeriana Clade (Dipsacales): Diversity and Evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYW022

21 January 2018

Identifiers

DOI

10.1093/SYSBIO/SYW022

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release_ltbxka3ykzgmnmhqxctixe7zzy

15 September 2017

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PubMed ID

27016728

1 reference

PubMed ID

27016728