User:Charles Matthews/ContentMine workshop 3 March 2019
Jump to navigation
Jump to search
Try it!
Try it!
Links[edit]
- NCBI2wikidata and GMT tools on GitHub
- ScienceSourceIngest tool on GitHub
- PubMed - Searching Medical Literature: Using Medical Subject Headings (MeSH)
- WD:SSFL for the focus list
- ScienceSource wiki is at http://sciencesource.wmflabs.org
- SS data schema
- List of articles on the ScienceSource wiki
- ScienceSource pulmonology drugs found
- Display of drugs and diseases in Nosocomial Legionnaire's disease--a case report and review of the literature (Q35653011), including cephalothin (Q2736126), erythromycin (Q213511) and tobramycin (Q1758380)
- http://sciencesource.wmflabs.org/wiki/Article:Nosocomial_Legionnaire%27s_disease--a_case_report_and_review_of_the_literature_(4532100)
- Another such display
- w:WP:MEDRS
- See here for the first version of a MEDRS algorithm, and below for a possible handling of MEDDATE for neglected diseases.
- Directory of Open Access Journals (DOAJ). Algorithm output depends on adding the DOAJ ID: missing information issue.
Endocrinology diseases[edit]
#Instance of disease, medical speciality pulmonology
SELECT ?item ?itemLabel
WHERE {
?item wdt:P31 wd:Q12136 .
?item wdt:P1995 wd:Q203337 .
SERVICE wikibase:label { bd:serviceParam wikibase:language "en" }
}
PLOS list subjects query[edit]
Comment: Run without DOAJ and add info on journals ...
SELECT DISTINCT ?item ?itemLabel ?journalLabel ?subjectLabel
WHERE {
?item wdt:P5008 wd:Q55439927;
wdt:P31 wd:Q7318358;
wdt:P577 ?date;
wdt:P1433 ?journal.
?journal wdt:P5115 [ ].
{VALUES ?subject
{wd:Q949694 wd:Q2447562 wd:Q649558 wd:Q326071 wd:Q203133
wd:Q842428 wd:Q11679861 wd:Q2264130 wd:Q2360849 wd:Q1345113
wd:Q1597571 wd:Q2841329 wd:Q2665559 wd:Q30953 wd:Q738292
wd:Q154874 wd:Q2859732 wd:Q39222 wd:Q326638 wd:Q162272
wd:Q809561 wd:Q18975737 wd:Q1017169 wd:Q12090 wd:Q327298
wd:Q326648 wd:Q18975220 wd:Q36956 wd:Q155098 wd:Q690032
wd:Q193216 wd:Q682798 wd:Q922029 wd:Q41083 wd:Q76973
wd:Q16877704 wd:Q247096 wd:Q167178 wd:Q304601
wd:Q331283 wd:Q1475667 wd:Q388646 wd:Q777087 wd:Q1102300
wd:Q1048084 wd:Q719656 wd:Q2528129 wd:Q1760607 wd:Q192100
wd:Q1137321 wd:Q221159
}
}
?item wdt:P921 ?subject.
FILTER (?date >= "2011-01-01T00:00:00Z"^^xsd:dateTime)
SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
}