virus protein (E169)

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language codelabeldescriptionaliasesedit
envirus proteinschema that adds to the generic protein schema (E167) to apply on virus protein shapesedit
deVirus-ProteinEntity-Schema für ein Virus-Protein, aufbauend auf dem Schema E167 für Proteine allgemeinedit
esproteína de virusEsquema que añade al esquema genérico de proteína (E167) las propiedades específicas de la proteína de virusedit
frprotéine viraleedit
pt-brproteína viralesquema para proteínas viraisedit
IMPORT <https://www.wikidata.org/wiki/Special:EntitySchemaText/E165>
IMPORT <https://www.wikidata.org/wiki/Special:EntitySchemaText/E167>
IMPORT <https://www.wikidata.org/wiki/Special:EntitySchemaText/E170>
IMPORT <https://www.wikidata.org/wiki/Special:EntitySchemaText/E265>
IMPORT <https://www.wikidata.org/wiki/Special:EntitySchemaText/E266>

PREFIX E165: <https://www.wikidata.org/wiki/Special:EntitySchemaText/E165#>
PREFIX E167: <https://www.wikidata.org/wiki/Special:EntitySchemaText/E167#>
PREFIX E170: <https://www.wikidata.org/wiki/Special:EntitySchemaText/E170#>
PREFIX E265: <https://www.wikidata.org/wiki/Special:EntitySchemaText/E265#>
PREFIX E266: <https://www.wikidata.org/wiki/Special:EntitySchemaText/E266#>

PREFIX wd: <http://www.wikidata.org/entity/>
PREFIX p: <http://www.wikidata.org/prop/>
PREFIX ps: <http://www.wikidata.org/prop/statement/>
PREFIX wdt: <http://www.wikidata.org/prop/direct/>
PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
PREFIX prov: <http://www.w3.org/ns/prov#>
PREFIX pq: <http://www.wikidata.org/prop/qualifier/>
PREFIX pr:  <http://www.wikidata.org/prop/reference/>

# Example SPARQL query: select * where { ?x wdt:P31 wd:Q8054 } limit 5

start = @<#wikidata-virus-protein>

<#wikidata-virus-protein> @E167:wikidata-protein AND {
  p:P703 				@<#P703_found_in_taxon> ;
  prov:wasDerivedFrom 	@E265:reference+ ;
}

<#P703_found_in_taxon> {
   ps:P703 				@E170:corona-virus ; # the gene is found in taxon [P703] 'some virus' 
  prov:wasDerivedFrom 	@E265:reference+ ;
}

<#P702_encoded_by> {
  ps:P702				@E165:wikidata-virus-gene ; 
  prov:wasDerivedFrom 	@E265:uniprot-reference;
}

<#P703_found_in_taxon_virus> {    
  ps:P703 				@E170:corona-virus ; 
  prov:wasDerivedFrom 	@E265:ncbi-gene-reference ;
}

## Lists with Wikidata items
<#gene_types> [
  wd:Q20747295 # protein-coding gene
  wd:Q284578 # snRNA
  wd:Q284416 # snoRNA
  wd:Q215980 # rRNA
  wd:Q201448 # tRNA
  wd:Q277338 # pseudo
  wd:Q11053 # miscRNA
  wd:Q25323710 # scRNA
]