SARS-CoV-2 Nucleocapsid protein attenuates stress granule formation and alters gene expression via direct interaction with host mRNAs (Q104502003)

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object named as

Jack F. Greenblatt

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author name string

Syed Nabeel-Shah

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Hyunmin Lee

2

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Nujhat Ahmed

3

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Edyta Marcon

4

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Shaghayegh Farhangmehr

5

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Shuye Pu

6

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Giovanni L. Burke

7

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Kanwal Ashraf

8

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Hong Wei

9

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Guoqing Zhong

10

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Hua Tang

11

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Jianyi Yang

12

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Zhaolei Zhang

A pneumonia outbreak associated with a new coronavirus of probable bat origin

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publication date

23 October 2020

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cites work

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Structural basis for RNA replication by the SARS-CoV-2 polymerase

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Ribonucleocapsid Formation of Severe Acute Respiratory Syndrome Coronavirus through Molecular Action of the N-Terminal Domain of N Protein

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Evaluation of Nucleocapsid and Spike Protein-based ELISAs for detecting antibodies against SARS-CoV-2

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The coronavirus nucleocapsid is a multifunctional protein.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Biochemical characterization of SARS-CoV-2 nucleocapsid protein

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Crystal structure of SARS-CoV-2 nucleocapsid protein RNA binding domain reveals potential unique drug targeting sites

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

SARS-CoV-2 nucleocapsid protein undergoes liquid-liquid phase separation stimulated by RNA and partitions into phases of human ribonucleoproteins

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Virus-host interactome and proteomic survey of PBMCs from COVID-19 patients reveal potential virulence factors influencing SARS-CoV-2 pathogenesis

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Rasputin a decade on and more promiscuous than ever? A review of G3BPs

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Regulation of stress granules in virus systems

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Phosphorylation of G3BP1-S149 does not influence stress granule assembly

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

G3BP-Caprin1-USP10 complexes mediate stress granule condensation and associate with 40S subunits

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The RasGAP-associated endoribonuclease G3BP assembles stress granules

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

G3BP1 Is a Tunable Switch that Triggers Phase Separation to Assemble Stress Granules

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

New World and Old World Alphaviruses Have Evolved to Exploit Different Components of Stress Granules, FXR and G3BP Proteins, for Assembly of Viral Replication Complexes

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

A proposed role for the SARS-CoV-2 nucleocapsid protein in the formation and regulation of biomolecular condensates

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Immunological characterizations of the nucleocapsid protein based SARS vaccine candidates

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The Nucleocapsid Protein of SARS-CoV-2 Abolished Pluripotency in Human Induced Pluripotent Stem Cells

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

SAINTexpress: improvements and additional features in Significance Analysis of INTeractome software

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Structural basis of RNA recognition by the SARS-CoV-2 nucleocapsid phosphoprotein

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Ataxin-2-like is a regulator of stress granules and processing bodies

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The RNA-Binding Protein Rasputin/G3BP Enhances the Stability and Translation of Its Target mRNAs

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Lactate and pyruvate promote oxidative stress resistance through hormetic ROS signaling

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Viral-mediated stabilization of AU-rich element containing mRNA contributes to cell transformation

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The hepatitis C viral nonstructural protein 5A stabilizes growth-regulatory human transcripts

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Conserved GU-rich elements mediate mRNA decay by binding to CUG-binding protein 1

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

AU-rich elements: characterization and importance in mRNA degradation

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Turnover of AU-rich-containing mRNAs during stress: a matter of survival.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Endoplasmic reticulum as a potential therapeutic target for covid-19 infection management?

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Human-chromatin-related protein interactions identify a demethylase complex required for chromosome segregation

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

iCLIP: protein-RNA interactions at nucleotide resolution

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Multiparameter functional diversity of human C2H2 zinc finger proteins.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Integration of biological networks and gene expression data using Cytoscape

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

ProHits-viz: a suite of web tools for visualizing interaction proteomics data.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

ShinyGO: a graphical gene-set enrichment tool for animals and plants

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Improved protein structure prediction using predicted interresidue orientations

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

The HDOCK server for integrated protein-protein docking

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

GENCODE reference annotation for the human and mouse genomes

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

STAR: ultrafast universal RNA-seq aligner

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

clusterProfiler: an R package for comparing biological themes among gene clusters.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

PureCLIP: capturing target-specific protein-RNA interaction footprints from single-nucleotide CLIP-seq data

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

MetaPlotR: a Perl/R pipeline for plotting metagenes of nucleotide modifications and other transcriptomic sites.

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

BEDTools: a flexible suite of utilities for comparing genomic features

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113

25 December 2020

1 reference

https://api.crossref.org/works/10.1101/2020.10.23.342113