Comparative modelling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificity (Q21045393)

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Comparative modelling of barley-grain aspartic proteinase: a structural rationale for observed hydrolytic specificity.

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English	Comparative modelling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificity	scientific article	Comparative modelling of barley-grain aspartic proteinase: a structural rationale for observed hydrolytic specificity.

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scholarly article

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Europe PubMed Central

1 August 2017

Comparative modelling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificity (English)

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Comparative modelling of barley-grain aspartic proteinase: a structural rationale for observed hydrolytic specificity (English)

1 reference

Europe PubMed Central

1 August 2017

structural biology

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based on heuristic

inferred from title

4

object named as

Blundell TL

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Europe PubMed Central

1 August 2017

4

object named as

Tom L. Blundell

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author name string

Kunchur Guruprasad

1

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Kirsi Törmäkangas

2

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Jukka Kervinen

3

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Guruprasad K

1

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Europe PubMed Central

1 August 2017

Törmäkangas K

2

1 reference

Europe PubMed Central

1 August 2017

Kervinen J

3

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Europe PubMed Central

1 August 2017

language of work or name

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publication date

September 1994

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1 September 1994

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Europe PubMed Central

1 August 2017

2 references

Europe PubMed Central

1 August 2017

352

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Europe PubMed Central

1 August 2017

2

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Europe PubMed Central

1 August 2017

131-136

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Europe PubMed Central

1 August 2017

Evolution in the structure and function of aspartic proteases

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https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

The structure and function of the aspartic proteinases

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

Primary structure of a barley-grain aspartic proteinase. A plant aspartic proteinase resembling mammalian cathepsin D

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

Hydrolytic specificity of the barley grain aspartic proteinase

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

A systematic series of synthetic chromophoric substrates for aspartic proteinases

1 reference

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Identification of the aspartic proteinases from human erythrocyte membranes and gastric mucosa (slow-moving proteinase) as catalytically equivalent to cathepsin E

1 reference

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21 January 2018

Exploration of subsite binding specificity of human cathepsin D through kinetics and rule-based molecular modeling

1 reference

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21 January 2018

Redesign of the substrate specificity of human cathepsin D: the dominant role of position 287 in the S2 subsite.

1 reference

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21 January 2018

Knowledge based modelling of homologous proteins, Part II: Rules for the conformations of substituted sidechains

1 reference

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21 January 2018

18th Sir Hans Krebs lecture. Knowledge-based protein modelling and design

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

From comparisons of protein sequences and structures to protein modelling and design

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X-ray analyses of aspartic proteinases. II. Three-dimensional structure of the hexagonal crystal form of porcine pepsin at 2.3 A resolution

1 reference

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X-ray analyses of peptide-inhibitor complexes define the structural basis of specificity for human and mouse renins

1 reference

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X-ray analysis at 2.0 A resolution of mouse submaxillary renin complexed with a decapeptide inhibitor CH-66, based on the 4-16 fragment of rat angiotensinogen

1 reference

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Crystal structures of native and inhibited forms of human cathepsin D: implications for lysosomal targeting and drug design

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An evaluation of the performance of an automated procedure for comparative modelling of protein tertiary structure

1 reference

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Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds

1 reference

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Fragment ranking in modelling of protein structure. Conformationally constrained environmental amino acid substitution tables.

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A graphics model building and refinement system for macromolecules

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The structure of a synthetic pepsin inhibitor complexed with endothiapepsin

1 reference

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The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

Alignment and searching for common protein folds using a data bank of structural templates

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

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Use of amino acid environment-dependent substitution tables and conformational propensities in structure prediction from aligned sequences of homologous proteins. I. Solvent accessibility classes.

1 reference

https://api.crossref.org/works/10.1016%2F0014-5793%2894%2900935-X

21 January 2018

Use of amino acid environment-dependent substitution tables and conformational propensities in structure prediction from aligned sequences of homologous proteins. II. Secondary structures.

1 reference

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Prediction of protein secondary structure at better than 70% accuracy

1 reference

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Improved prediction of protein secondary structure by use of sequence profiles and neural networks

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Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

1 reference

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PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

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SETOR: hardware-lighted three-dimensional solid model representations of macromolecules

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A Structural Basis for Sequence Comparisons

1 reference

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Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

1 reference

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Aspartic proteinase from barley grains is related to mammalian lysosomal cathepsin D

1 reference

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21 January 2018

Knowledge based modelling of homologous proteins, Part I: Three-dimensional frameworks derived from the simultaneous superposition of multiple structures

1 reference

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Molecular recognition in protein families: a database of aligned three-dimensional structures of related proteins

1 reference

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21 January 2018

Identifiers

10.1016/0014-5793(94)00935-X

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

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