Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains (Q21093360)

5 August 2022

Rose Ann Cattolico

1

Rose Ann

Cattolico

1 reference

5 August 2022

Michael A Jacobs

2

Michael A

Jacobs

1 reference

5 August 2022

Yang Zhou

3

Yang

Zhou

1 reference

5 August 2022

Jean Chang

4

Jean

Chang

1 reference

5 August 2022

Melinda Duplessis

5

Melinda

Duplessis

1 reference

5 August 2022

Terry Lybrand

6

Terry

Lybrand

1 reference

5 August 2022

John McKay

7

John

McKay

1 reference

5 August 2022

Han Chuan Ong

8

Han Chuan

Ong

1 reference

5 August 2022

Elizabeth Sims

9

Elizabeth

Sims

1 reference

describes a project that uses

5 August 2022

language of work or name

English

0 references

publication date

2008

0 references

published in

BMC Genomics

0 references

volume

9

0 references

issue

1

0 references

page(s)

211

0 references

MUMmer

object named as

MUMMER

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-211

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-211

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Chloroplast His-to-Asp signal transduction: a potential mechanism for plastid gene regulation in Heterosigma akashiwo (Raphidophyceae)

12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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Kinetic Complexity, Homogeneity, and Copy Number of Chloroplast DNA from the Marine Alga Olisthodiscus luteus

12 September 2017

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12 September 2017

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Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1,5-bisphosphate carboxylase and the 32,000-dalton Q(B) protein: Phylogenetic implications

12 September 2017

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12 September 2017

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12 September 2017

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Potential roles for diatomists in nanotechnology

12 September 2017

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Comparative analysis of the complete plastid genome sequence of the red alga Gracilaria tenuistipitata var. liui provides insights into the evolution of rhodoplasts and their relationship to other plastids

12 September 2017

1 reference

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Genetic recombination and the cell cycle: what we have learned from chromosome dimers

12 September 2017

1 reference

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Circular genome visualization and exploration using CGView

12 September 2017

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Circles: the replication-recombination-chromosome segregation connection

12 September 2017

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Identification and characterization of the dif Site from Bacillus subtilis

12 September 2017

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A tale of two genomes: resolution of dimeric chromosomes in Escherichia coli and Bacillus subtilis

12 September 2017

1 reference

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Gene-cluster analysis in chloroplast genomics

12 September 2017

1 reference

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The plastid genome of the cryptophyte alga, Guillardia theta: complete sequence and conserved synteny groups confirm its common ancestry with red algae

12 September 2017

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12 September 2017

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Phylogenetic analyses of the rbcL sequences from haptophytes and heterokont algae suggest their chloroplasts are unrelated

12 September 2017

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Analysis of the Bacillus subtilis S10 ribosomal protein gene cluster identifies two promoters that may be responsible for transcription of the entire 15-kilobase S10-spc-alpha cluster

12 September 2017

1 reference

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The integrase family of tyrosine recombinases: evolution of a conserved active site domain

12 September 2017

1 reference

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Chloroplast mRNA 3'-end processing by a high molecular weight protein complex is regulated by nuclear encoded RNA binding proteins

12 September 2017

1 reference

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Secondary structure of the leader transcript from the Escherichia coli S10 ribosomal protein operon

12 September 2017

1 reference

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The integrase family of site-specific recombinases: regional similarities and global diversity

12 September 2017

1 reference

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Gene for the ribulose-1,5-bisphosphate carboxylase small subunit protein of the marine chromophyte Olisthodiscus luteus is similar to that of a chemoautotrophic bacterium

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Interactions of the site-specific recombinases XerC and XerD with the recombination site dif.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Comparative organization of chloroplast genomes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Secondary Structures Common to Chloroplast mRNA 3′-Untranslated Regions Direct Cleavage by CSP41, an Endoribonuclease Belonging to the Short Chain Dehydrogenase/Reductase Superfamily

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Specific sequence elements in the 5' untranslated regions of rbcL and atpB gene mRNas stabilize transcripts in the chloroplast of Chlamydomonas reinhardtii

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

The large ribosomal protein gene cluster of a cryptomonad plastid: gene organization, sequence and evolutionary implications.

30 May 2018

1 reference

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The plastid-encoded ccsA gene is required for heme attachment to chloroplast c-type cytochromes.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Evidence for a second conserved arginine residue in the integrase family of recombination proteins

30 May 2018

1 reference

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Recombination within the inverted repeat sequences of the Chlamydomonas reinhardii chloroplast genome produces two orientation isomers.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: comparison with other plastid genomes of the red lineage.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

The complete plastid genome sequence of the haptophyte Emiliania huxleyi: a comparison to other plastid genomes.

29 November 2018

1 reference

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Methods for obtaining and analyzing whole chloroplast genome sequences.

29 November 2018

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A thylakoidal processing peptidase from the heterokont alga Heterosigma akashiwo

29 November 2018

1 reference

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Comparative genomics study of inverted repeats in bacteria.

29 November 2018

1 reference

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Production of atmospheric sulfur by oceanic plankton: biogeochemical, ecological and evolutionary links.

29 November 2018

1 reference

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A conserved His-Asp signal response regulator-like gene in Heterosigma akashiwo chloroplasts.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2410131

A new intein in cyanobacteria and its significance for the spread of inteins.

29 November 2018

1 reference

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The gene for a spinach chloroplast isoleucine tRNA has a methionine anticodon.

29 November 2018

1 reference

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Structural organization of the chloroplast genome of the chromophytic alga Vaucheria bursata

29 November 2018

1 reference

12 December 2020

Chloroplast ribosomal DNA organization in the chromophytic alga Olisthodiscus luteus

1 reference

12 December 2020

Concanavalin A-induced discharge of glycocalyx of raphidophycean flagellates, Chattonella marina and Heterosigma akashiwo

1 reference

12 December 2020

Photoregulation of Chloroplast Gene Transcription in the Chromophytic Alga Heterosigma carterae

1 reference

12 December 2020

A High-Resolution Gene Map of the Chloroplast Genome of the Red Alga Porphyra purpurea

1 reference

12 December 2020

Nuclear deoxyribonucleic acid characterization of the marine chromophyte Olisthodiscus luteus

1 reference

12 December 2020

Striking differences in mitochondrial tRNA import between different plant species

1 reference

12 December 2020

Structure and organization of rhodophyte and chromophyte plastid genomes: implications for the ancestry of plastids

1 reference

12 December 2020

Variation in Plastid Number: Effect on Chloroplast and Nuclear Deoxyribonucleic Acid Complement in the Unicellular Alga Olisthodiscus luteus

1 reference

12 December 2020

Preservation of algal and higher plant ribosomal RNA integrity during extraction and electrophoretic quantitation

1 reference

12 December 2020

The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae

1 reference

12 December 2020

Purification and characterization of phosphoribulokinase from the marine chromophytic alga Heterosigma carterae

1 reference

12 December 2020

Synchronous Growth and Plastid Replication in the Naturally Wall-less Alga Olisthodiscus luteus

1 reference

12 December 2020

Biosynthesis of Tetrapyrrole Pigment Precursors : Formation and Utilization of Glutamyl-tRNA for delta-Aminolevulinic Acid Synthesis by Isolated Enzyme Fractions from Chlorella Vulgaris

1 reference

12 December 2020

Extranuclear DNA of a Marine Chromophytic Alga : RESTRICTION ENDONUCLEASE ANALYSIS

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-9-211

1 reference

3700570

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-211

1 reference

9 September 2019

3700570

1 reference

1 reference

1 reference