LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated (Q21115743)

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mammalian protein found in Homo sapiens

U6 snRNA-associated Sm-like protein LSm7
LSM7 U6 small nuclear RNA and mRNA degradation associated
LSM7
LSM7 homolog, U6 small nuclear RNA associated

Language	Label	Description	Also known as
English	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated	mammalian protein found in Homo sapiens	U6 snRNA-associated Sm-like protein LSm7 LSM7 U6 small nuclear RNA and mRNA degradation associated LSM7 LSM7 homolog, U6 small nuclear RNA associated

Statements

1 reference

13 November 2019

UniProt protein ID

LSM domain superfamily

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/Q9UK45

Sm-like protein Lsm7

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/Q9UK45

LSM domain, eukaryotic/archaea-type, protein family

1 reference

based on heuristic

inferred from protein domain or family

1 reference

13 November 2019

UniProt protein ID

1 reference

13 November 2019

UniProt protein ID

molecular function

protein binding

determination method

8 references

9 May 2019

Translation and replication of hepatitis C virus genomic RNA depends on ancient cellular proteins that control mRNA fates

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

Dynamic protein-protein interaction wiring of the human spliceosome

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

Toward an understanding of the protein interaction network of the human liver

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

Analysis of a high-throughput yeast two-hybrid system and its use to predict the function of intracellular proteins encoded within the human MHC class III region

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

TACC1-chTOG-Aurora A protein complex in breast cancer

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

A protein interaction framework for human mRNA degradation

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

A proteome-scale map of the human interactome network

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

9 May 2019

Carcinogenesis and translational controls: TACC1 is down-regulated in human cancers and associates with mRNA regulators

IntAct protein interaction database

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

U6 snRNA binding

determination method

1 reference

9 May 2019

A doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

8 April 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

catalytic step 2 spliceosome

determination method

1 reference

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

spliceosomal tri-snRNP complex

determination method

1 reference

27 March 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9UK45&geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

U12-type spliceosomal complex

determination method

1 reference

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

Lsm1-7-Pat1 complex

determination method

1 reference

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

spliceosomal complex

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

U2-type prespliceosome

determination method

1 reference

9 May 2019

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

27 March 2018

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9UK45&geneProductId=UniProtKB:Q9UK45

determination method

U4/U6 x U5 tri-snRNP complex

determination method

1 reference

9 May 2019

Molecular architecture of the human U4/U6.U5 tri-snRNP

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

U2-type precatalytic spliceosome

determination method

1 reference

9 May 2019

Cryo-EM Structure of a Pre-catalytic Human Spliceosome Primed for Activation

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

9 May 2019

A doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

biological process

determination method

1 reference

27 March 2018

http://www.ebi.ac.uk/QuickGO/annotations?protein=Q9UK45&geneProductId=UniProtKB:Q9UK45

determination method

mRNA processing

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

exonucleolytic catabolism of deadenylated mRNA

determination method

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

determination method

1 reference

9 May 2019

UniProt protein ID

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

nuclear-transcribed mRNA catabolic process

determination method

1 reference

9 May 2019

http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:Q9UK45

determination method

mRNA splicing, via spliceosome

determination method

LSM domain, eukaryotic/archaea-type

1 reference

InterPro Release 71.0

http://www.ebi.ac.uk/interpro/protein/Q9UK45

Identifiers

RefSeq protein ID

1 reference

30 May 2020

1 reference

30 May 2020

UniProt protein ID

1 reference

13 November 2019

UniProt protein ID

Ensembl protein ID

ENSP00000252622

1 reference

Ensembl Release 99

Ensembl protein ID

ENSP00000252622

ENSP00000466556

1 reference

Ensembl Release 99

Ensembl protein ID

ENSP00000466556

ENSP00000467145

1 reference

Ensembl Release 99

Ensembl protein ID

ENSP00000467145

ENSP00000485007

1 reference

Ensembl Release 99

Ensembl protein ID

ENSP00000485007

PDB structure ID

1 reference

UniProt protein ID

9 August 2016

language of work or name

Sitelinks

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