Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering (Q21256656)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

title

Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

main subject

metabolic engineering

0 references

0 references

1

Marjan De Mey

Marjan

De Mey

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Jo Maertens

2

Jo

Maertens

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Gaspard J Lequeux

series ordinal

3

author given names

Gaspard J

author last names

Lequeux

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Wim K Soetaert

series ordinal

4

author given names

Wim K

author last names

Soetaert

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

Erick J Vandamme

series ordinal

5

author given names

Erick J

author last names

Vandamme

1 reference

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31 December 2019

language of work or name

English

0 references

publication date

18 June 2007

1 reference

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31 December 2019

1 reference

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31 December 2019

volume

7

1 reference

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31 December 2019

issue

1

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page(s)

34

1 reference

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Analysis of E. coli promoter sequences

31 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

MFA for overdetermined systems reviewed and compared with rna expression data to elucidate the difference in shikimate yield between carbon- and phosphate-limited continuous cultures of E. coli W3110.shik1.

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Identifying functionally important mutations from phenotypically diverse sequence data

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

A synthetic promoter library for constitutive gene expression in Lactobacillus plantarum

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Comparison of DNA and RNA quantification methods suitable for parameter estimation in metabolic modeling of microorganisms.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Synthetic promoter libraries--tuning of gene expression

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Response to Hammer et al.: Tuning genetic control--importance of thorough promoter characterization versus generating promoter diversity

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Tuning genetic control through promoter engineering

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Tunable promoters in systems biology

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Predicting enzyme function from protein sequence.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Modulation of gene expression made easy

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Modeling and simulation: tools for metabolic engineering

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Gene-expression tools for the metabolic engineering of bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Artificial promoters for metabolic optimization

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Identification of an UP element consensus sequence for bacterial promoters

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

The sequence of spacers between the consensus sequences modulates the strength of prokaryotic promoters

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Compilation and analysis ofEscherichia colipromoter DNA sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Plasmid transformation of Escherichia coli and other bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Identification and analysis of 'extended -10' promoters in Escherichia coli.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Prokaryotic promoters in biotechnology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Compilation of E. coli mRNA promoter sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Promoter strength prediction based on occurrence frequencies of consensus patterns.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Dynamic modeling of the central carbon metabolism of Escherichia coli.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Metabolome dynamic responses of Saccharomyces cerevisiae to simultaneous rapid perturbations in external electron acceptor and electron donor.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

Phylogenetic trees: visualizing, customizing and detecting incongruence.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1913913

29 November 2018

Metabolic engineering

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17572914

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1472-6750-7-34

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

31 December 2019

1047966552

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17572914%20AND%20SRC:MED&resulttype=core&format=json

31 December 2019

2 references