Construction of an adult barnacle (Balanus amphitrite) cDNA library and selection of reference genes for quantitative RT-PCR studies (Q21263033)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

Construction of an adult barnacle (Balanus amphitrite) cDNA library and selection of reference genes for quantitative RT-PCR studies (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

0 references

2

Marco Borra

Marco

Borra

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

author name string

Tristano Bacchetti De Gregoris

1

Tristano

Bacchetti De Gregoris

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Elio Biffali

3

Elio

Biffali

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Thomas Bekel

4

Thomas

Bekel

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

J Grant Burgess

5

J Grant

Burgess

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Richard R Kirby

6

Richard R

Kirby

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

Anthony S Clare

7

Anthony S

Clare

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

language of work or name

English

0 references

publication date

24 June 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

published in

BMC Molecular Biology

1 reference

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1 February 2020

volume

10

1 reference

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1 February 2020

issue

1

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page(s)

62

1 reference

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BRIGEP--the BRIDGE-based genome-transcriptome-proteome browser

1 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

The COG database: an updated version includes eukaryotes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Gene ontology: tool for the unification of biology

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Primer3 on the WWW for general users and for biologist programmers

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

CAP3: A DNA sequence assembly program

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Profile hidden Markov models

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Quantification of mRNA using real-time RT-PCR

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

InterPro--an integrated documentation resource for protein families, domains and functional sites

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Complementary DNA sequencing: expressed sequence tags and human genome project

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

The Sequence Analysis and Management System -- SAMS-2.0: data management and sequence analysis adapted to changing requirements from traditional sanger sequencing to ultrafast sequencing technologies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Proteomic analysis of larvae during development, attachment, and metamorphosis in the fouling barnacle, Balanus amphitrite

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers for environmental studies and genome evolution

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

An alpha2-macroglobulin-like protein is the cue to gregarious settlement of the barnacle Balanus amphitrite

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Real-time RT-PCR normalisation; strategies and considerations.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper – Excel-based tool using pair-wise correlations

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

The Ship Hull Fouling Penalty

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Towards a catalogue of genes transcribed in multiple tissues of Mytilus galloprovincialis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

The TIGR gene indices: reconstruction and representation of expressed gene sequences

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Expressed sequence tags--ESTablishing bridges between genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

GenDB--an open source genome annotation system for prokaryote genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Balanus amphitrite or Amphibalanus amphitrite? A note on barnacle nomenclature.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

SPUD: a quantitative PCR assay for the detection of inhibitors in nucleic acid preparations.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Gene expression during early ascidian metamorphosis requires signalling by Hemps, an EGF-like protein.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Exogenous reference RNA for normalization of real-time quantitative PCR.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2713238

Evidence for the involvement of cyclic AMP in the pheromonal modulation of barnacle settlement

29 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19552808

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2199-10-62

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

1 February 2020

1045355008

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19552808%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

PubMed publication ID

19552808

2 references