Genome characterization of the oleaginous fungus Mortierella alpina (Q21560898)

2

Wei

Chen

1 reference

1 September 2022

Yun Feng

3

Yun

Feng

1 reference

1 September 2022

Yan Ren

4

Yan

Ren

1 reference

1 September 2022

Zhennan Gu

5

Zhennan

Gu

1 reference

1 September 2022

Haiqin Chen

6

Haiqin

Chen

1 reference

1 September 2022

Hongchao Wang

7

Hongchao

Wang

1 reference

1 September 2022

Michael J Thomas

8

Michael J

Thomas

1 reference

1 September 2022

Baixi Zhang

9

Baixi

Zhang

1 reference

1 September 2022

Isabelle M Berquin

10

Isabelle M

Berquin

1 reference

1 September 2022

Yang Li

11

Yang

Li

1 reference

1 September 2022

Jiansheng Wu

12

Jiansheng

Wu

1 reference

1 September 2022

Huanxin Zhang

13

Huanxin

Zhang

1 reference

1 September 2022

Yuanda Song

14

Yuanda

Song

1 reference

1 September 2022

Xiang Liu

15

Xiang

Liu

1 reference

1 September 2022

James S Norris

16

James S

Norris

1 reference

1 September 2022

Suriguga Wang

17

Suriguga

Wang

1 reference

1 September 2022

Peng Du

18

Peng

Du

1 reference

1 September 2022

Junguo Shen

19

Junguo

Shen

1 reference

1 September 2022

Na Wang

20

Na

Wang

1 reference

1 September 2022

Yanlin Yang

21

Yanlin

Yang

1 reference

1 September 2022

Wei Wang

22

Wei

Wang

1 reference

1 September 2022

Lu Feng

23

Lu

Feng

1 reference

1 September 2022

Colin Ratledge

24

Colin

Ratledge

1 reference

1 September 2022

Hao Zhang

25

Hao

Zhang

1 reference

1 September 2022

Yong Q Chen

26

Yong Q

Creative Commons Attribution 4.0 International

Chen

1 reference

1 September 2022

language of work or name

English

0 references

publication date

2011

0 references

published in

PLOS One

0 references

volume

6

0 references

issue

12

0 references

page(s)

e28319

0 references

copyright license

start time

8 December 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans

19 March 2017

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Rfam: annotating non-coding RNAs in complete genomes

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Automated finishing with autofinish

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The COG database: new developments in phylogenetic classification of proteins from complete genomes

19 March 2017

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

19 March 2017

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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

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Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis

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Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

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Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

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Genome sequencing and analysis of Aspergillus oryzae

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Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

19 March 2017

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Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

19 March 2017

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THE STRUCTURAL BIOLOGY OF TYPE II FATTY ACID BIOSYNTHESIS

19 March 2017

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The genome sequence of the rice blast fungus Magnaporthe grisea

19 March 2017

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Genome evolution in yeasts

19 March 2017

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The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome

19 March 2017

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A RAPID METHOD OF TOTAL LIPID EXTRACTION AND PURIFICATION

19 March 2017

1 reference

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The genome sequence of the filamentous fungus Neurospora crassa

19 March 2017

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The genome sequence of Schizosaccharomyces pombe

19 March 2017

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The crystal structure of a mammalian fatty acid synthase

19 March 2017

1 reference

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Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

19 March 2017

1 reference

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The crystal structure of yeast fatty acid synthase, a cellular machine with eight active sites working together

19 March 2017

1 reference

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Structure of fungal fatty acid synthase and implications for iterative substrate shuttling

19 March 2017

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The KEGG resource for deciphering the genome

19 March 2017

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OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

19 March 2017

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19 March 2017

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A higher-level phylogenetic classification of the Fungi

19 March 2017

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Repbase Update, a database of eukaryotic repetitive elements

19 March 2017

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PANTHER: a library of protein families and subfamilies indexed by function

7 April 2017

1 reference

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Gene prediction with a hidden Markov model and a new intron submodel

7 April 2017

1 reference

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Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

7 April 2017

1 reference

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Rapid isolation of high molecular weight plant DNA

7 April 2017

1 reference

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Cytochrome P450 enzymes in the fungal kingdom

7 April 2017

1 reference

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Single cell oil production by Mortierella alpina

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

The multienzyme architecture of eukaryotic fatty acid synthases

12 September 2017

1 reference

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Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training

12 September 2017

1 reference

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Multi-targeted therapy of cancer by omega-3 fatty acids

12 September 2017

1 reference

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Dietary fat-gene interactions in cancer

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

12 September 2017

1 reference

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A Sanger/pyrosequencing hybrid approach for the generation of high-quality draft assemblies of marine microbial genomes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Fatty acid biosynthesis in microorganisms being used for Single Cell Oil production

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Quantitative measurement of different ceramide species from crude cellular extracts by normal-phase high-performance liquid chromatography coupled to atmospheric pressure ionization mass spectrometry

12 September 2017

1 reference

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PRINTS and its automatic supplement, prePRINTS.

12 September 2017

1 reference

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Regulation of lipid accumulation in oleaginous micro-organisms

12 September 2017

1 reference

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The biochemistry and molecular biology of lipid accumulation in oleaginous microorganisms.

12 September 2017

1 reference

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Delta6-fatty acid desaturase from an arachidonic acid-producing Mortierella fungus. Gene cloning and its heterologous expression in a fungus, Aspergillus

12 September 2017

1 reference

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Essential fatty acids in health and chronic disease

12 September 2017

1 reference

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Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry

12 September 2017

1 reference

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Establishment of Agrobacterium tumefaciens-mediated transformation of an oleaginous fungus, Mortierella alpina 1S-4, and its application for eicosapentaenoic acid producer breeding

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Quantitative analysis of phospholipids by thin-layer chromatography and phosphorus analysis of spots

30 May 2018

1 reference

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Malic enzyme: the controlling activity for lipid production? Overexpression of malic enzyme in Mucor circinelloides leads to a 2.5-fold increase in lipid accumulation.

30 May 2018

1 reference

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Arachidonic Acid production by fungi.

30 May 2018

1 reference

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Delta 9-fatty acid desaturase from arachidonic acid-producing fungus. Unique gene sequence and its heterologous expression in a fungus, Aspergillus

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Isolation of a Delta5-fatty acid desaturase gene from Mortierella alpina.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

On the safety of Mortierella alpina for the production of food ingredients, such as arachidonic acid

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

High performance liquid chromatographic separation and direct ultraviolet detection of phospholipids

30 May 2018

1 reference

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Effect of culture media and conditions on polyunsaturated fatty acids production by Mortierella alpina

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

Identification of Delta12-fatty acid desaturase from arachidonic acid-producing mortierella fungus by heterologous expression in the yeast Saccharomyces cerevisiae and the fungus Aspergillus oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

A novel fungal omega3-desaturase with wide substrate specificity from arachidonic acid-producing Mortierella alpina 1S-4.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

Multiple isoforms of malic enzyme in the oleaginous fungus, Mortierella alpina

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

De novo fragment assembly with short mate-paired reads: Does the read length matter?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028319

A highly conserved effector in Fusarium oxysporum is required for full virulence on Arabidopsis

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Cloning and characterization of a gene encoding a malic enzyme involved in anaerobic growth in Mucor circinelloides.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3234268

Simultaneous quantitative analysis of bioactive sphingolipids by high-performance liquid chromatography-tandem mass spectrometry

29 November 2018

1 reference

12 December 2020

Architecture of a fungal fatty acid synthase at 5 A resolution

1 reference

12 December 2020

Evaluation of single-cell sources of docosahexaenoic acid and arachidonic acid: 3-month rat oral safety study with an in utero phase

1 reference

12 December 2020

Evaluation of a subchronic (13-week) oral toxicity study, preceded by an in utero exposure phase, with arachidonic acid oil derived from Mortierella alpina in rats

1 reference

12 December 2020

Enzymatic determination of triglyceride, free cholesterol, and total cholesterol in tissue lipid extracts

1 reference

12 December 2020

Polyunsaturated fatty acids (PUFAs) content of the fungus Mortierella alpina isolated from soil

1 reference

12 December 2020

Architecture of mammalian fatty acid synthase at 4.5 A resolution

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0028319

Identifiers

DOI

1 reference

341097

ADS bibcode

2011PLoSO...628319W

0 references

341097

1 reference

1 reference

1 reference