Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis (Q21561002)

2 September 2022

Geraldine Butler

5

Geraldine

Butler

1 reference

2 September 2022

Kenneth H Wolfe

4

Kenneth H

Wolfe

1 reference

2 September 2022

author name string

Alessandro Riccombeni

series ordinal

1

author given names

Alessandro

author last names

Riccombeni

1 reference

2 September 2022

Genevieve Vidanes

series ordinal

2

author given names

Genevieve

author last names

Vidanes

1 reference

Creative Commons Attribution 4.0 International

2 September 2022

language of work or name

English

0 references

publication date

2012

0 references

published in

PLOS One

0 references

volume

7

0 references

issue

4

0 references

page(s)

e35750

0 references

copyright license

start time

26 April 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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19 March 2017

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The transcription factor Ndt80 does not contribute to Mrr1-, Tac1-, and Upc2-mediated fluconazole resistance in Candida albicans

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Homing endonuclease genes: the rise and fall and rise again of a selfish element

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19 March 2017

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Using RNA-seq to determine the transcriptional landscape and the hypoxic response of the pathogenic yeast Candida parapsilosis

12 September 2017

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12 September 2017

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12 September 2017

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12 September 2017

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Comparative genomics of xylose-fermenting fungi for enhanced biofuel production

12 September 2017

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12 September 2017

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Candida albicans Hap43 is a repressor induced under low-iron conditions and is essential for iron-responsive transcriptional regulation and virulence

12 September 2017

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Comprehensive annotation of the transcriptome of the human fungal pathogen Candida albicans using RNA-seq

12 September 2017

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Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser

12 September 2017

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Functional specialization and differential regulation of short-chain carboxylic acid transporters in the pathogen Candida albicans

12 September 2017

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Characterization of biofilms formed by Candida parapsilosis, C. metapsilosis, and C. orthopsilosis

12 September 2017

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12 September 2017

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12 September 2017

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Prevalence, distribution, and antifungal susceptibility profiles of Candida parapsilosis, C. orthopsilosis, and C. metapsilosis in a tertiary care hospital

12 September 2017

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12 September 2017

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the hyphal-associated adhesin and invasin Als3 of Candida albicans mediates iron acquisition from host ferritin

12 September 2017

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Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis

12 September 2017

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Mutations in the multi-drug resistance regulator MRR1, followed by loss of heterozygosity, are the main cause of MDR1 overexpression in fluconazole-resistant Candida albicans strains

12 September 2017

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A gain-of-function mutation in the transcription factor Upc2p causes upregulation of ergosterol biosynthesis genes and increased fluconazole resistance in a clinical Candida albicans isolate.

12 September 2017

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Prevalence and susceptibility profile of Candida metapsilosis and Candida orthopsilosis: results from population-based surveillance of candidemia in Spain

12 September 2017

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Lodderomyces elongisporus masquerading as Candida parapsilosis as a cause of bloodstream infections

12 September 2017

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Discovering the secrets of the Candida albicans agglutinin-like sequence (ALS) gene family--a sticky pursuit

12 September 2017

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Transcriptional response of Candida parapsilosis following exposure to farnesol

12 September 2017

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Candida albicans Iff11, a secreted protein required for cell wall structure and virulence

12 September 2017

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Computational and experimental approaches double the number of known introns in the pathogenic yeast Candida albicans

12 September 2017

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Genotyping of Candida orthopsilosis clinical isolates by amplification fragment length polymorphism reveals genetic diversity among independent isolates and strain maintenance within patients

12 September 2017

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Als3 is a Candida albicans invasin that binds to cadherins and induces endocytosis by host cells

12 September 2017

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The nuclear-encoded inteins of fungi

12 September 2017

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Morphological and ecological similarities: wood-boring beetles associated with novel xylose-fermenting yeasts, Spathaspora passalidarum gen. sp. nov. and Candida jeffriesii sp. nov.

12 September 2017

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Critical role of Bcr1-dependent adhesins in C. albicans biofilm formation in vitro and in vivo.

12 September 2017

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Epidemiology, risk factors, and prognosis of Candida parapsilosis bloodstream infections: case-control population-based surveillance study of patients in Barcelona, Spain, from 2002 to 2003.

12 September 2017

1 reference

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Molecular genotyping of Candida parapsilosis group I clinical isolates by analysis of polymorphic microsatellite markers

12 September 2017

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A mutation in Tac1p, a transcription factor regulating CDR1 and CDR2, is coupled with loss of heterozygosity at chromosome 5 to mediate antifungal resistance in Candida albicans

12 September 2017

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Candida orthopsilosis and Candida metapsilosis spp. nov. to replace Candida parapsilosis groups II and III.

12 September 2017

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Epidemiologic and molecular characterization of an outbreak of Candida parapsilosis bloodstream infections in a community hospital

12 September 2017

1 reference

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Evolution of divergent DNA recognition specificities in VDE homing endonucleases from two yeast species

12 September 2017

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Mutations in the RING domain of TFB3, a subunit of yeast transcription factor IIH, reveal a role in cell cycle progression

12 September 2017

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Inteins: structure, function, and evolution

12 September 2017

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Adaptation for horizontal transfer in a homing endonuclease

12 September 2017

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Inducible azole resistance associated with a heterogeneous phenotype in Candida albicans.

12 September 2017

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Prevalence of small inversions in yeast gene order evolution

12 September 2017

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A novel multidrug efflux transporter gene of the major facilitator superfamily from Candida albicans (FLU1) conferring resistance to fluconazole.

12 September 2017

1 reference

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Experimental induction of fluconazole resistance in Candida tropicalis ATCC 750

12 September 2017

1 reference

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Global regulatory functions of Oaf1p and Pip2p (Oaf2p), transcription factors that regulate genes encoding peroxisomal proteins in Saccharomyces cerevisiae

12 September 2017

1 reference

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The Candida albicans HYR1 gene, which is activated in response to hyphal development, belongs to a gene family encoding yeast cell wall proteins

12 September 2017

1 reference

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Three distinct genotypes within Candida parapsilosis from clinical sources

12 September 2017

1 reference

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Homing of a DNA endonuclease gene by meiotic gene conversion in Saccharomyces cerevisiae

12 September 2017

1 reference

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Genotypic identification and characterization of species and strains within the genus Candida by using random amplified polymorphic DNA

12 September 2017

1 reference

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New polymorphic microsatellite markers able to distinguish among Candida parapsilosis sensu stricto isolates

12 September 2017

1 reference

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In vitro fungicidal activities of echinocandins against Candida metapsilosis, C. orthopsilosis, and C. parapsilosis evaluated by time-kill studies.

27 September 2017

1 reference

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A naturally occurring proline-to-alanine amino acid change in Fks1p in Candida parapsilosis, Candida orthopsilosis, and Candida metapsilosis accounts for reduced echinocandin susceptibility

27 September 2017

1 reference

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Differential regulation of the transcriptional repressor NRG1 accounts for altered host-cell interactions in Candida albicans and Candida dubliniensis

27 September 2017

1 reference

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Horizontal transmission of Candida parapsilosis candidemia in a neonatal intensive care unit

27 September 2017

1 reference

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Compilation and analysis of intein sequences

27 September 2017

1 reference

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Evolution of yeast noncoding RNAs reveals an alternative mechanism for widespread intron loss

27 September 2017

1 reference

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Transcriptional profiling of azole-resistant Candida parapsilosis strains

27 September 2017

1 reference

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Evolution of mating within the Candida parapsilosis species group

30 May 2018

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Molecular screening for Candida orthopsilosis and Candida metapsilosis among Danish Candida parapsilosis group blood culture isolates: proposal of a new RFLP profile for differentiation

30 May 2018

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Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

30 May 2018

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Geographic distribution and antifungal susceptibility of the newly described species Candida orthopsilosis and Candida metapsilosis in comparison to the closely related species Candida parapsilosis

30 May 2018

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Complete DNA sequences of the mitochondrial genomes of the pathogenic yeasts Candida orthopsilosis and Candida metapsilosis: insight into the evolution of linear DNA genomes from mitochondrial telomere mutants

30 May 2018

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Candida bloodstream infections: comparison of species distribution and resistance to echinocandin and azole antifungal agents in Intensive Care Unit (ICU) and non-ICU settings in the SENTRY Antimicrobial Surveillance Program (2008-2009).

30 May 2018

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Variation in Candida spp. distribution and antifungal resistance rates among bloodstream infection isolates by patient age: report from the SENTRY Antimicrobial Surveillance Program (2008–2009)

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Outbreak of Candida parapsilosis in a neonatal intensive care unit: a health care workers source.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Molecular epidemiology of Candida parapsilosis sepsis from outbreak investigations in neonatal intensive care units

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Morphotypic and genotypic characterization of sequential Candida parapsilosis isolates from an outbreak in a pediatric intensive care unit

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Correlation of restriction fragment length polymorphism genotyping with internal transcribed spacer sequence, randomly amplified polymorphic DNA and multilocus sequence groupings for Candida parapsilosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Correlation between biofilm formation and the hypoxic response in Candida parapsilosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Molecular differentiation and antifungal susceptibilities of Candida parapsilosis isolated from patients with bloodstream infections

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Molecular epidemiology and antifungal susceptibility of Candida parapsilosis sensu stricto, Candida orthopsilosis, and Candida metapsilosis in Taiwan

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Characterization of Candida parapsilosis complex strains isolated from invasive fungal infections.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Virulence of Candida parapsilosis, Candida orthopsilosis, and Candida metapsilosis in reconstituted human tissue models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Candida metapsilosis as the least virulent member of the 'C. parapsilosis' complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Biofilm production and evaluation of antifungal susceptibility amongst clinical Candida spp. isolates, including strains of the Candida parapsilosis complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

GRIMM: genome rearrangements web server

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Lower filamentation rates of Candida dubliniensis contribute to its lower virulence in comparison with Candida albicans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

A sensitive predictor for potential GPI lipid modification sites in fungal protein sequences and its application to genome-wide studies for Aspergillus nidulans, Candida albicans, Neurospora crassa, Saccharomyces cerevisiae and Schizosaccharomyces p

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

An eight-cysteine-containing CFEM domain unique to a group of fungal membrane proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

An endocytic mechanism for haemoglobin-iron acquisition in Candida albicans

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Dynamics of in vitro acquisition of resistance by Candida parapsilosis to different azoles

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Prevalence and antifungal susceptibility patterns of new cryptic species inside the species complexes Candida parapsilosis and Candida glabrata among blood isolates from a Spanish tertiary hospital

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

PRP8 intein in Ajellomycetaceae family pathogens: sequence analysis, splicing evaluation and homing endonuclease activity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

The reacquisition of biotin prototrophy in Saccharomyces cerevisiae involved horizontal gene transfer, gene duplication and gene clustering

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Acquisition of prokaryotic genes by fungal genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Degeneration and domestication of a selfish gene in yeast: molecular evolution versus site-directed mutagenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

Evolution of the carboxylate Jen transporters in fungi

21 January 2018

1 reference

12 December 2020

A family of Candida cell surface haem-binding proteins involved in haemin and haemoglobin-iron utilization

1 reference

12 December 2020

Outbreak of Candida albicans fungaemia in a neonatal intensive care unit

1 reference

12 December 2020

Complete inventory of ABC proteins in human pathogenic yeast, Candida albicans

1 reference

12 December 2020

Differences in biofilm production by three genotypes of Candida parapsilosis from clinical sources

1 reference

12 December 2020

Biofilm formation by Candida albicans mutants for genes coding fungal proteins exhibiting the eight-cysteine-containing CFEM domain

1 reference

12 December 2020

Characterization of Candida parapsilosis complex isolates

1 reference

12 December 2020

Gentisate and 3-oxoadipate pathways in the yeast Candida parapsilosis: identification and functional analysis of the genes coding for 3-hydroxybenzoate 6-hydroxylase and 4-hydroxybenzoate 1-hydroxylase

1 reference

12 December 2020

Strain characterization of Candida parapsilosis fungemia by molecular typing methods

1 reference

12 December 2020

Genetic diversity of the internal transcribed spacers (ITS) and 5.8S rRNA genes among the clinical isolates of Candida parapsilosis in Brazil and Japan

1 reference

12 December 2020

Transcriptional Response of Candida parapsilosis following Exposure to Farnesol

1 reference

12 December 2020

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0035750

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PONE.0035750

1 reference

release_2ql4nrrfsrdxtnzi6qyrt5gxqi

0 references

0 references

2698058

1 reference

1 reference

2698058

1 reference