Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis (Q21563376)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22046142%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

title

Comparative genomic analysis of human fungal pathogens causing paracoccidioidomycosis (English)

1 reference

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15 January 2020

main subject

paracoccidioidomycosis

1 reference

37

Gustavo Nino-Vega

Gustavo

Nino-Vega

1 reference

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15 January 2020

10

Marcin Grynberg

Marcin

Grynberg

1 reference

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15 January 2020

32

Jeremy Zucker

Jeremy

Zucker

1 reference

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15 January 2020

4

Anna Muszewska

Anna

Muszewska

1 reference

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15 January 2020

17

Li-Jun Ma

Li-Jun

Ma

1 reference

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15 January 2020

42

Christina A Cuomo

Christina A

Cuomo

1 reference

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15 January 2020

6

Alexandre M Bailão

Alexandre M

Bailão

1 reference

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15 January 2020

Sabrina Rodríguez-Brito

22

Sabrina Rodríguez-Brito

Sabrina

Rodríguez-Brito

1 reference

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15 January 2020

Maria M T Walter

28

1 reference

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15 January 2020

34

Gustavo H Goldman

Gustavo H

Goldman

1 reference

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15 January 2020

39

Gioconda San-Blas

Gioconda

San-Blas

1 reference

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Célia Maria de Almeida Soares

15 January 2020

40

Celia Maria de Almeida Soares

Celia Maria de Almeida

Soares

1 reference

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15 January 2020

21

Maristela Pereira

Maristela

Pereira

1 reference

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15 January 2020

5

Jonathan Goldberg

Jonathan

Goldberg

1 reference

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Márcia Eliana da Silva Ferreira

15 January 2020

Flavia Villaça Morais

Flavia V Morais

20

Flavia V

Morais

1 reference

6 February 2023

Márcia Eliana da Silva Ferreira

8

Márcia Eliana da Silva

Ferreira

1 reference

6 February 2023

Marcelo Macedo Brigido

Marcelo Macedo Brigido

7

Marcelo Macedo

Brigido

1 reference

6 February 2023

Rosana Puccia

38

Rosana

Puccia

1 reference

6 February 2023

Iran Malavazi

18

Iran

Malavazi

1 reference

6 February 2023

35

Brian J

Haas

Brian J Haas

1 reference

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15 January 2020

14

Chinnappa D

Kodira

Chinnappa D Kodira

1 reference

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15 January 2020

31

Qiandong

Zeng

Qiandong Zeng

1 reference

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15 January 2020

41

Bruce W

Birren

Bruce W Birren

1 reference

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15 January 2020

author name string

Christopher A Desjardins

1

Christopher A

Desjardins

1 reference

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15 January 2020

Mia D Champion

2

Mia D

Champion

1 reference

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15 January 2020

Jason W Holder

3

Jason W

Holder

1 reference

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15 January 2020

Ana Maria Garcia

9

Ana Maria

Garcia

1 reference

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15 January 2020

Sharvari Gujja

11

Sharvari

Gujja

1 reference

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15 January 2020

David I Heiman

12

David I

Heiman

1 reference

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15 January 2020

Matthew R Henn

13

Matthew R

Henn

1 reference

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15 January 2020

Henry León-Narváez

15

Henry

León-Narváez

1 reference

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15 January 2020

Larissa V G Longo

16

Larissa V G

Longo

1 reference

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15 January 2020

Alisson L Matsuo

19

Alisson L

Matsuo

1 reference

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15 January 2020

Sharadha Sakthikumar

23

Sharadha

Sakthikumar

1 reference

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15 January 2020

Silvia M Salem-Izacc

24

Silvia M

Salem-Izacc

1 reference

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15 January 2020

Sean M Sykes

25

Sean M

Sykes

1 reference

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15 January 2020

Marcus Melo Teixeira

26

Marcus Melo

Teixeira

1 reference

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15 January 2020

Milene C Vallejo

27

Milene C

Vallejo

1 reference

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15 January 2020

Chandri Yandava

29

Chandri

Yandava

1 reference

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15 January 2020

Sarah Young

30

Sarah

Young

1 reference

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15 January 2020

Maria Sueli Felipe

33

Maria Sueli

Felipe

1 reference

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15 January 2020

Juan G McEwen

36

Juan G

McEwen

1 reference

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15 January 2020

Maria Emília Machado Telles Walter

Maria Emília Machado Telles

Walter

28

1 reference

2 September 2022

language of work or name

English

0 references

publication date

27 October 2011

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15 January 2020

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15 January 2020

volume

7

1 reference

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15 January 2020

issue

10

1 reference

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15 January 2020

page(s)

e1002345

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Creative Commons Attribution 4.0 International

15 January 2020

copyright license

start time

27 October 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

MUMmer

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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12 September 2017

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12 September 2017

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12 September 2017

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PredGPI: a GPI-anchor predictor

12 September 2017

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Conserved factors Ryp2 and Ryp3 control cell morphology and infectious spore formation in the fungal pathogen Histoplasma capsulatum

12 September 2017

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Diversity in Paracoccidioides brasiliensis. The PbGP43 gene as a genetic marker

12 September 2017

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Inhibition of a secreted glutamic peptidase prevents growth of the fungus Talaromyces emersonii

12 September 2017

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LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

12 September 2017

1 reference

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Transcriptome profiling of Paracoccidioides brasiliensis yeast-phase cells recovered from infected mice brings new insights into fungal response upon host interaction

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Dimorphism and virulence in fungi

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

The structure and synthesis of the fungal cell wall

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Defining virulence genes in the dimorphic fungi.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Transcriptome analysis of Paracoccidioides brasiliensis cells undergoing mycelium-to-yeast transition

12 September 2017

1 reference

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A metalloproteinase of Coccidioides posadasii contributes to evasion of host detection

12 September 2017

1 reference

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Cryptic speciation and recombination in the fungus Paracoccidioides brasiliensis as revealed by gene genealogies.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Transcriptional profiles of the human pathogenic fungus Paracoccidioides brasiliensis in mycelium and yeast cells.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Glutamic protease distribution is limited to filamentous fungi

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

CLANS: a Java application for visualizing protein families based on pairwise similarity

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Sequence elements necessary for transcriptional activation of BAD1 in the yeast phase of Blastomyces dermatitidis.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Phylogenomic analysis of type I polyketide synthase genes in pathogenic and saprobic ascomycetes.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Transposable Elements in Filamentous Fungi

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Studies on the growth of Histoplasma capsulatum. IV. Factors influencing conversion of the mycelial phase to the yeast phase.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

S-Adenosyl-L-methionine inhibitors delta(24)-sterol methyltransferase and delta(24(28))-sterol methylreductase as possible agents against Paracoccidioides brasiliensis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Expressed sequence tag analysis of the human pathogen Paracoccidioides brasiliensis yeast phase: identification of putative homologues of Candida albicans virulence and pathogenicity genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Chitin synthesis as target for antifungal drugs

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Transcriptome characterization of the dimorphic and pathogenic fungus Paracoccidioides brasiliensis by EST analysis.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Whole-genome sequence assembly for mammalian genomes: Arachne 2.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Secreted proteases from pathogenic fungi

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Paracoccidioides brasiliensis and paracoccidioidomycosis: molecular approaches to morphogenesis, diagnosis, epidemiology, taxonomy and genetics

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

12 September 2017

Fungal histidine kinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

The habitat of Paracoccidioides brasiliensis: how far from solving the riddle?

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Paracoccidioidomycosis: an update

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Mycelial- to yeast-phase transitions of the dimorphic fungi Blastomyces dermatitidis and Paracoccidioides brasiliensis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Genome size and ploidy of Paracoccidioides brasiliensis reveals a haploid DNA content: flow cytometry and GP43 sequence analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Optical mapping: a novel, single-molecule approach to genomic analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Characterization of Paracoccidioides brasiliensis isolates by random amplified polymorphic DNA analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Biochemical Studies on the Thermal Dimorphism of Paracoccidioides brasiliensis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Caspofungin affects growth of Paracoccidioides brasiliensis in both morphological phases.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Cloning, mechanistic and functional analysis of a fungal sterol C24-methyltransferase implicated in brassicasterol biosynthesis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

SMURF: Genomic mapping of fungal secondary metabolite clusters

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Global control of dimorphism and virulence in fungi

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Exocellular proteolytic activity of Paracoccidioides brasiliensis: cleavage of components associated with the basement membrane

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Cloning and expression of cDNA encoding a protein that binds a palindromic promoter element essential for induction of fungal cutinase by plant cutin

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

The b alleles of U. maydis, whose combinations program pathogenic development, code for polypeptides containing a homeodomain-related motif

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

Paracoccidioidomycosis: the dimension of the problem of a neglected disease

30 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Virulence of Paracoccidioides brasiliensis and gp43 expression in isolates bearing known PbGP43 genotype.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Global nutritional profiling for mutant and chemical mode-of-action analysis in filamentous fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

DAGchainer: a tool for mining segmental genome duplications and synteny

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

The mitochondrial genome from the thermal dimorphic fungus Paracoccidioides brasiliensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

2.2 A refined crystal structure of the catalytic subunit of cAMP-dependent protein kinase complexed with MnATP and a peptide inhibitor

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Suppression of hyphal formation in Candida albicans by mutation of a STE12 homolog

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Presence and expression of the mating type locus in Paracoccidioides brasiliensis isolates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Secondary metabolic gene cluster silencing in Aspergillus nidulans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Survey of the Botrytis cinerea chitin synthase multigenic family through the analysis of six euascomycetes genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Cytokines produced by susceptible and resistant mice in the course of Paracoccidioides brasiliensis infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

A universal classification of eukaryotic transposable elements implemented in Repbase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Does the membrane's physical state control the expression of heat shock and other genes?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

Hydrolytic enzymes in Paracoccidioides brasiliensis--ecological aspects.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3203195

GeneTRACE-reconstruction of gene content of ancestral species

29 November 2018

1 reference

12 December 2020

Electrophoretic karyotype of clinical isolates of Paracoccidioides brasiliensis

1 reference

12 December 2020

Differential expression of chitin synthase genes during temperature-induced dimorphic transitions in Paracoccidioides brasiliensis

1 reference

12 December 2020

Structure elucidation of sphingolipids from the mycopathogen Paracoccidioides brasiliensis: an immunodominant beta-galactofuranose residue is carried by a novel glycosylinositol phosphorylceramide antigen

1 reference

12 December 2020

Transcriptome analysis and molecular studies on sulfur metabolism in the human pathogenic fungus Paracoccidioides brasiliensis

1 reference

12 December 2020

Functional analysis of CaRAP1 , encoding the Repressor/activator protein 1 of Candida albicans

1 reference

12 December 2020

Control of Dimorphism in Candida Albicans by Zinc: Effect on Cell Morphology and Composition

1 reference

12 December 2020

Isolation of the CHS4 gene of Paracoccidioides brasiliensis and its accommodation in a new class of chitin synthases

1 reference

12 December 2020

The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification 1

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002345

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1371/JOURNAL.PGEN.1002345

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22046142%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22046142%20AND%20SRC:MED&resulttype=core&format=json

15 January 2020

PubMed publication ID

22046142

2 references