Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana (Q22122099)

7 February 2023

Robert E Jinkerson

2

Robert E.

Jinkerson

1 reference

7 February 2023

Susan I Fuerstenberg

3

Susan I.

Fuerstenberg

1 reference

7 February 2023

Hongseok Tae

4

Hongseok

Tae

1 reference

7 February 2023

Robert E Settlage

5

Robert E.

Settlage

1 reference

7 February 2023

Jeffrey L Boore

6

Jeffrey L.

Boore

1 reference

7 February 2023

Matthew C Posewitz

7

Matthew C.

Posewitz

1 reference

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics

7 February 2023

language of work or name

English

0 references

publication date

2012

0 references

published in

Nature Communications

0 references

volume

3

0 references

page(s)

686

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Genetic engineering of algae for enhanced biofuel production

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The Chlamydomonas genome reveals the evolution of key animal and plant functions

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Phytophthora Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The Genome of the Diatom Thalassiosira Pseudonana: Ecology, Evolution, and Metabolism

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Direct photosynthetic recycling of carbon dioxide to isobutyraldehyde

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Biodiesel from microalgae

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Biosynthesis of isoprenoids via the non-mevalonate pathway

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Stable nuclear transformation of the diatom Phaeodactylum tricornutum

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Microalgal triacylglycerols as feedstocks for biofuel production: perspectives and advances

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Locating proteins in the cell using TargetP, SignalP and related tools

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Microbial production of fatty-acid-derived fuels and chemicals from plant biomass

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Microalgae for oil: strain selection, induction of lipid synthesis and outdoor mass cultivation in a low-cost photobioreactor

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Biofuels: biomolecular engineering fundamentals and advances

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

High-efficiency homologous recombination in the oil-producing alga Nannochloropsis sp.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Engineering of microorganisms for the production of biofuels and perspectives based on systems metabolic engineering approaches

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The GreenCut2 resource, a phylogenomically derived inventory of proteins specific to the plant lineage

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

The effect of light, salinity, and nitrogen availability on lipid production by Nannochloropsis sp.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Carbon concentrating mechanisms in eukaryotic marine phytoplankton.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Engineering cyanobacteria to generate high-value products

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Engineering microbes to produce biofuels

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Changes in transcript abundance in Chlamydomonas reinhardtii following nitrogen deprivation predict diversion of metabolism

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Cultivation, photobioreactor design and harvesting of microalgae for biodiesel production: a critical review

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Increased lipid accumulation in the Chlamydomonas reinhardtii sta7-10 starchless isoamylase mutant and increased carbohydrate synthesis in complemented strains.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Algal lipid bodies: stress induction, purification, and biochemical characterization in wild-type and starchless Chlamydomonas reinhardtii

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Microalgae as a raw material for biofuels production.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

HECTAR: a method to predict subcellular targeting in heterokonts.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Inorganic nitrogen assimilation in Chlamydomonas

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Single-cell C(4) photosynthesis versus the dual-cell (Kranz) paradigm

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

High-frequency nuclear transformation of Chlamydomonas reinhardtii

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Transformation of chloroplast ribosomal RNA genes in Chlamydomonas: molecular and genetic characterization of integration events

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Expression of nitrate assimilation related genes in Chlamydomonas reinhardtii.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Genetic engineering of fatty acid chain length in Phaeodactylum tricornutum.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Chlamydomonas starchless mutant defective in ADP-glucose pyrophosphorylase hyper-accumulates triacylglycerol.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Transgenic microalgae as a non-antibiotic bactericide producer to defend against bacterial pathogen infection in the fish digestive tract.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Chloroplast genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana: comparison with other plastid genomes of the red lineage.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3293424

Light-dependent bicarbonate uptake and CO2 efflux in the marine microalga Nannochloropsis gaditana

29 November 2018

1 reference

12 December 2020

C3 and C4 pathways of photosynthetic carbon assimilation in marine diatoms are under genetic, not environmental, control

1 reference

12 December 2020

Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum

1 reference

12 December 2020

Resolving the compartmentation and function of C4 photosynthesis in the single-cell C4 species Bienertia sinuspersici

1 reference

12 December 2020

Acclimation of Nannochloropsis gaditana to different illumination regimes: Effects on lipids accumulation

1 reference

12 December 2020

CONDITIONAL PRODUCTION OF A FUNCTIONAL FISH GROWTH HORMONE IN THE TRANSGENIC LINE OF NANNOCHLOROPSIS OCULATA (EUSTIGMATOPHYCEAE)(1).

1 reference

12 December 2020

Chloroplast transformation in Chlamydomonas with high velocity microprojectiles

1 reference

12 December 2020

Effect of temperature and nitrogen concentration on the growth and lipid content of Nannochloropsis oculata and Chlorella vulgaris for biodiesel production

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1688

7 January 2021

inferred from DOI database lookup

Utilization of oil palm as a source of renewable energy in Malaysia

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1688

7 January 2021

inferred from DOI database lookup

Inorganic carbon acquisition and its energization in eustigmatophyte algae

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1688

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NCOMMS1688

1 reference

698877

ADS bibcode

2012NatCo...3..686R

0 references

release_7uafglpod5expiq7teaqndjdpy

0 references

Fatcat ID

0 references

698877

1 reference

1 reference

1 reference