Non–coding RNA genes and the modern RNA world (Q22122367)

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0030563

snRNA pseudouridylation guide activity

1 reference

Gene Ontology release 2020-05-02

1

Sean R. Eddy

Sean R.

Eddy

1 reference

Dimensions Publication ID

Dimensions

1000346912

New goals for the U.S. Human Genome Project: 1998-2003.

6 February 2023

language of work or name

English

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publication date

December 2001

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published in

Nature Reviews Genetics

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volume

2

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page(s)

919-929

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issue

12

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cites work

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The Sequence of the Human Genome

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Gene index analysis of the human genome estimates approximately 120,000 genes.

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Analysis of expressed sequence tags indicates 35,000 human genes

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The non-coding RNAs as riboregulators

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Analysis of the yeast genome: identification of new non-coding and small ORF-containing RNAs

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RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse

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An extensive class of small RNAs in Caenorhabditis elegans

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An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans

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Identification of novel genes coding for small expressed RNAs

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Novel small RNA-encoding genes in the intergenic regions of Escherichia coli

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Computational identification of noncoding RNAs in E. coli by comparative genomics

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Identification of novel small RNAs using comparative genomics and microarrays

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A small particulate component of the cytoplasm

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Unstable ribonucleic acid revealed by pulse labelling of Escherichia coli

21 January 2018

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Two groups of small stable RNAs

21 January 2018

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SnRNAs, SnRNPs, and RNA Processing

21 January 2018

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21 January 2018

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Highly diverged U4 and U6 small nuclear RNAs required for splicing rare AT-AC introns

21 January 2018

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Classification of introns: U2-type or U12-type

21 January 2018

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21 January 2018

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Ribonuclease P: an enzyme with an essential RNA component

21 January 2018

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Signal recognition particle contains a 7S RNA essential for protein translocation across the endoplasmic reticulum

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Noncoding RNA genes in dosage compensation and imprinting

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X-chromosome inactivation: counting, choice and initiation

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Dosage compensation rox!

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The sins of the fathers and mothers: genomic imprinting in mammalian development.

21 January 2018

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Mechanisms of genomic imprinting

21 January 2018

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Large-scale evaluation of imprinting status in the Prader-Willi syndrome region: an imprinted direct repeat cluster resembling small nucleolar RNA genes.

21 January 2018

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Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization

21 January 2018

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Biological regulation by antisense RNA in prokaryotes

21 January 2018

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The sense of naturally transcribed antisense RNAs in plants

21 January 2018

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The SCA8 transcript is an antisense RNA to a brain-specific transcript encoding a novel actin-binding protein (KLHL1)

21 January 2018

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The nucleolar snRNAs: catching up with the spliceosomal snRNAs

21 January 2018

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The small nucleolar RNAs

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

21 January 2018

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

21 January 2018

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Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs

21 January 2018

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A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus

21 January 2018

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

21 January 2018

1 reference

Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

21 January 2018

1 reference

Birth of the snoRNPs: the evolution of the modification-guide snoRNAs.

21 January 2018

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Guided tours: from precursor snoRNA to functional snoRNP.

21 January 2018

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The numerous modified nucleotides in eukaryotic ribosomal RNA

21 January 2018

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Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA.

21 January 2018

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Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts

21 January 2018

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A computational screen for methylation guide snoRNAs in yeast

21 January 2018

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Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2'-O-methylation sites

21 January 2018

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Identification of 10 novel snoRNA gene clusters from Arabidopsis thaliana

21 January 2018

1 reference

Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNA

21 January 2018

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Homologs of small nucleolar RNAs in Archaea

21 January 2018

1 reference

Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes

21 January 2018

1 reference

Modification of U6 spliceosomal RNA is guided by other small RNAs

21 January 2018

1 reference

Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing

21 January 2018

1 reference

A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

21 January 2018

1 reference

Nucleolar factors direct the 2'-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA

21 January 2018

1 reference

Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2'-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs

21 January 2018

1 reference

Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs

21 January 2018

1 reference

Small evolutionarily conserved RNA, resembling C/D box small nucleolar RNA, is transcribed from PWCR1, a novel imprinted gene in the Prader-Willi deletion region, which Is highly expressed in brain

21 January 2018

1 reference

Imprinted expression of small nucleolar RNAs in brain: time for RNomics

21 January 2018

1 reference

The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14

21 January 2018

1 reference

Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans

21 January 2018

1 reference

The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA

21 January 2018

1 reference

The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation

21 January 2018

1 reference

The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans

21 January 2018

1 reference

Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA

21 January 2018

1 reference

Gene silencing: shrinking the black box of RNAi

21 January 2018

1 reference

Gene silencing by double-stranded RNA.

21 January 2018

1 reference

21 January 2018

RNA interference--2001.

1 reference

RNA silencing in plants--defense and counterdefense

21 January 2018

1 reference

A species of small antisense RNA in posttranscriptional gene silencing in plants

21 January 2018

1 reference

A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA

21 January 2018

1 reference

RNA interference is mediated by 21- and 22-nucleotide RNAs

21 January 2018

1 reference

Non-coding RNA's: lightning strikes twice

21 January 2018

1 reference

Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing

21 January 2018

1 reference

The complete genome sequence of Escherichia coli K-12

21 January 2018

1 reference

Small RNAs in Escherichia coli.

21 January 2018

1 reference

Riboregulation in Escherichia coli: DsrA RNA acts by RNA:RNA interactions at multiple loci

21 January 2018

1 reference

Riboregulation by DsrA RNA: trans-actions for global economy

21 January 2018

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Noncoding RNA gene detection using comparative sequence analysis

21 January 2018

1 reference

The Escherichia coli OxyS regulatory RNA represses fhlA translation by blocking ribosome binding

21 January 2018

1 reference

A computational approach to identify genes for functional RNAs in genomic sequences

21 January 2018

1 reference

Cartilage-hair hypoplasia gene assigned to chromosome 9 by linkage analysis

21 January 2018

1 reference

Mutations in the RNA component of RNase MRP cause a pleiotropic human disease, cartilage-hair hypoplasia

21 January 2018

1 reference

A big development for a small RNA

21 January 2018

1 reference

The RNA component of telomerase is mutated in autosomal dominant dyskeratosis congenita

21 January 2018

1 reference

21 January 2018

The smallest known gene

1 reference

On the total number of genes and their length distribution in complete microbial genomes

21 January 2018

1 reference

Translational and structural requirements of the early nodulin gene enod40, a short-open reading frame-containing RNA, for elicitation of a cell-specific growth response in the alfalfa root cortex

21 January 2018

1 reference

Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs.

21 January 2018

1 reference

No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution

21 January 2018

1 reference

A computational analysis of sequence features involved in recognition of short introns

21 January 2018

1 reference

RNA expression analysis using a 30 base pair resolution Escherichia coli genome array

21 January 2018

1 reference

Self-splicing RNA: Autoexcision and autocyclization of the ribosomal RNA intervening sequence of tetrahymena

21 January 2018

1 reference

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

21 January 2018

1 reference

Origin of life: The RNA world

21 January 2018

1 reference

The origin of the genetic code

21 January 2018

1 reference

Modern metabolism as a palimpsest of the RNA world

21 January 2018

1 reference

Relics from the RNA world

21 January 2018

1 reference

The path from the RNA world.

21 January 2018

1 reference

Birth of the snoRNPs: the evolution of RNase MRP and the eukaryotic pre-rRNA-processing system

21 January 2018

1 reference

RNA: versatility in form and function

21 January 2018

1 reference

Genetic regulatory mechanisms in the synthesis of proteins

21 January 2018

2 references

21 January 2018

7 January 2021

A bulged lin-4/lin-14 RNA duplex is sufficient for Caenorhabditis elegans lin-14 temporal gradient formation.

1 reference

An unstable intermediate carrying information from genes to ribosomes for protein synthesis.

21 January 2018

1 reference

How to count ... human genes

21 January 2018

1 reference

7 January 2021

The function of the nucleus in the synthesis of cytoplasmic proteins

1 reference

7 January 2021

Surprising Discovery with a Small RNA

1 reference

7 January 2021

Global regulation by the small RNA-binding protein CsrA and the non-coding RNA molecule CsrB

1 reference

7 January 2021

enod40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth

1 reference

7 January 2021

A soluble ribonucleic acid intermediate in protein synthesis

1 reference

19 October 2022

https://opencitations.net/index/coci/api/v1/citations/10.1016/S0021-9258(19)77302-5

Identifiers

DOI

10.1038/35103511

1 reference

Consolidated OpenCitations Corpus – April 2017

Dimensions Publication ID

1258193

1000346912

0 references

1258193

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

1 reference