Open source tools for large-scale neuroscience (Q22998480)

Current Opinion in Neurobiology

Europe PubMed Central

title

Open source tools for large-scale neuroscience (English)

0 references

0 references

Jeremy Freeman

1

0 references

language of work or name

English

0 references

publication date

June 2015

0 references

published in

0 references

volume

32

0 references

page(s)

156-163

0 references

cites work

Automated analysis of cellular signals from large-scale calcium imaging data

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

From cosmos to connectomes: the evolution of data-intensive science

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Spatio-temporal correlations and visual signalling in a complete neuronal population

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Reverse engineering the mouse brain

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Whole-brain functional imaging at cellular resolution using light-sheet microscopy

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Light-sheet functional imaging in fictively behaving zebrafish

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Mapping brain activity at scale with cluster computing

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Dimensionality reduction for large-scale neural recordings

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Visualizing mammalian brain area interactions by dual-axis two-photon calcium imaging

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

IPython: A System for Interactive Scientific Computing

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Regression-based identification of behavior-encoding neurons during large-scale optical imaging of neural activity at cellular resolution

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Fast nonnegative deconvolution for spike train inference from population calcium imaging

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

A Layered Grammar of Graphics

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Wave optics theory and 3-D deconvolution for the light field microscope

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Functional clustering drives encoding improvement in a developing brain network during awake visual learning

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Frontoparietal representations of task context support the flexible control of goal-directed cognition

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

Machine learning for neuroimaging with scikit-learn

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021

SIMA: Python software for analysis of dynamic fluorescence imaging data

1 reference

https://api.crossref.org/works/10.1016%2FJ.CONB.2015.04.002

7 January 2021