Structural basis and specificity of human otubain 1-mediated deubiquitination (Q24309375)

OTU deubiquitinase, ubiquitin aldehyde binding 2

GOA release 2020-03-11

1 reference

protein K48-linked deubiquitination

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

author

Sirano Dhe-Paganon

8

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Holger B. Kramer

Holger B Kramer

6

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Mikael Altun

Mikael Altun

4

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Mariola J. Ferraro

Mariola J Edelmann

1

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Benedikt M. Kessler

Benedikt M Kessler

9

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author name string

Alexander Iphöfer

2

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Masato Akutsu

3

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Katalin di Gleria

5

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Edda Fiebiger

Ultra-fast tandem mass spectrometry scanning combined with monolithic column liquid chromatography increases throughput in proteomic analysis.

7

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language of work or name

English

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publication date

1 March 2009

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published in

Biochemical Journal

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volume

418

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page(s)

379-90

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issue

2

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cites work

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Development of a bicistronic vector driven by the human polypeptide chain elongation factor 1alpha promoter for creation of stable mammalian cell lines that express very high levels of recombinant proteins

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Cloning and mapping of a human RBP56 gene encoding a putative RNA binding protein similar to FUS/TLS and EWS proteins

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Polyubiquitin chains: functions, structures, and mechanisms

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Partial molecular cloning, characterization, and analysis of the subcellular localization and expression patterns of the porcine OTUB1 gene

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A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

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Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa

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A genomic and functional inventory of deubiquitinating enzymes

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Ovarian tumor domain-containing viral proteases evade ubiquitin- and ISG15-dependent innate immune responses

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Identification of otubain 1 as a novel substrate for the Yersinia protein kinase using chemical genetics and mass spectrometry

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Molecular Basis for the Unique Deubiquitinating Activity of the NF-κB Inhibitor A20

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A deubiquitinating enzyme encoded by HSV-1 belongs to a family of cysteine proteases that is conserved across the family Herpesviridae

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Intracellular characterization of DDX39, a novel growth-associated RNA helicase

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Processing of X-ray diffraction data collected in oscillation mode

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Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde

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RNA and RNA binding proteins participate in early stages of cell spreading through spreading initiation centers

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A novel superfamily of predicted cysteine proteases from eukaryotes, viruses and Chlamydia pneumoniae

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Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family

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An array of possibilities for the study of autoimmunity

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Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains

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OTU takes the chains OUT

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Two isoforms of otubain 1 regulate T cell anergy via GRAIL

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Structural basis for SENP2 protease interactions with SUMO precursors and conjugated substrates

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Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14

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Crystal structure of human otubain 2.

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Otubains: a new family of cysteine proteases in the ubiquitin pathway

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Liposarcoma initiated by FUS/TLS-CHOP: the FUS/TLS domain plays a critical role in the pathogenesis of liposarcoma

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7 January 2021

Zinc-finger protein A20, a regulator of inflammation and cell survival, has de-ubiquitinating activity

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7 January 2021

Structure of the A20 OTU domain and mechanistic insights into deubiquitination

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7 January 2021

Identification of a novel isopeptidase with dual specificity for ubiquitin- and NEDD8-conjugated proteins

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A novel type of deubiquitinating enzyme

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Structure of the ubiquitin hydrolase UCH-L3 complexed with a suicide substrate

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Amino-terminal dimerization, NRDP1-rhodanese interaction, and inhibited catalytic domain conformation of the ubiquitin-specific protease 8 (USP8)

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Structural Basis for Ubiquitin Recognition by the Otu1 Ovarian Tumor Domain Protein

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Identification of novel protein-protein interactions using a versatile mammalian tandem affinity purification expression system

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Homeostatic MyD88-dependent signals cause lethal inflamMation in the absence of A20.

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TLS/FUS, a pro-oncogene involved in multiple chromosomal translocations, is a novel regulator of BCR/ABL-mediated leukemogenesis

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7 January 2021

MOLREP: an Automated Program for Molecular Replacement

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Coot: model-building tools for molecular graphics

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Refinement of macromolecular structures by the maximum-likelihood method

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7 January 2021

FUS expression alters the differentiation response to all-trans retinoic acid in NB4 and NB4R2 cells

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7 January 2021

BCR-ABL prevents c-jun-mediated and proteasome-dependent FUS (TLS) proteolysis through a protein kinase CbetaII-dependent pathway

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7 January 2021

Specific and covalent targeting of conjugating and deconjugating enzymes of ubiquitin-like proteins

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7 January 2021

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Expression of the FUS-CHOP fusion protein in primary mesenchymal progenitor cells gives rise to a model of myxoid liposarcoma.

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Protease degradomics: mass spectrometry discovery of protease substrates and the CLIP-CHIP, a dedicated DNA microarray of all human proteases and inhibitors

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7 January 2021

Identifiers

DOI

10.1042/BJ20081318

1 reference

Consolidated OpenCitations Corpus – April 2017

5053953

5053953

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

1 reference