Comparative analysis of environmental sequences: potential and challenges (Q24489522)

Philosophical Transactions of the Royal Society B

Europe PubMed Central

title

Comparative analysis of environmental sequences: potential and challenges (English)

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author

Peer Bork

series ordinal

3

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Christian von Mering

series ordinal

2

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Konrad Förstner

series ordinal

1

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language of work or name

English

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publication date

29 March 2006

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published in

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volume

361

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issue

1467

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page(s)

519-23

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cites work

Environments shape the nucleotide composition of genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

The genome Assembly Archive: a new public resource

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Characterization of uncultivated prokaryotes: isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

The Uncultured Microbial Majority

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Environmental genome shotgun sequencing of the Sargasso Sea

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Comparative metagenomics of microbial communities

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Community structure and metabolism through reconstruction of microbial genomes from the environment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Comparative genomic structure of prokaryotes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Characterization of large-insert DNA libraries from soil for environmental genomic studies of Archaea.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Metagenome survey of biofilms in drinking-water networks.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Prokaryotic diversity--magnitude, dynamics, and controlling factors

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Microbial minimalism: genome reduction in bacterial pathogens

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Unsuspected diversity among marine aerobic anoxygenic phototrophs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

A quality control algorithm for DNA sequencing projects

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1609345

Determination of bias in the relative abundance of oligonucleotides in DNA sequences.

27 September 2017

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2005.1809

Comparative DNA analysis across diverse genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2005.1809

Nitrogen-fixing aerobic bacteria have higher genomic GC content than non-fixing species within the same genus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2005.1809

Aerobiosis increases the genomic guanine plus cytosine content (GC%) in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2005.1809

Base composition bias might result from competition for metabolic resources.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2005.1809

Correlations between genomic GC levels and optimal growth temperatures in prokaryotes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16524840