A novel gene organization: intronic snoRNA gene clusters from Oryza sativa (Q24540323)

1

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Hui Zhou

2

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Peng Zhang

3

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Yue-Qin Chen

4

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Xiao Chen

5

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Chun-Long Chen

Identification of 10 novel snoRNA gene clusters from Arabidopsis thaliana

6

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language of work or name

English

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publication date

15 July 2002

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published in

Nucleic Acids Research

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volume

30

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issue

14

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page(s)

3262-72

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cites work

1 reference

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A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

24 March 2017

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Nucleolar factors direct the 2'-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA

24 March 2017

1 reference

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The snoRNA box C/D motif directs nucleolar targeting and also couples snoRNA synthesis and localization

24 March 2017

1 reference

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A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus

24 March 2017

1 reference

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

24 March 2017

1 reference

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Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

24 March 2017

2 references

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24 March 2017

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

27 September 2017

1 reference

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Multiple snoRNA gene clusters from Arabidopsis

24 March 2017

1 reference

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Identification of 66 box C/D snoRNAs in Arabidopsis thaliana: extensive gene duplications generated multiple isoforms predicting new ribosomal RNA 2'-O-methylation sites

24 March 2017

1 reference

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RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse

24 March 2017

1 reference

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Homologs of small nucleolar RNAs in Archaea

24 March 2017

1 reference

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Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes

24 March 2017

1 reference

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A computational screen for methylation guide snoRNAs in yeast

24 March 2017

1 reference

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

24 March 2017

1 reference

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The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

24 March 2017

1 reference

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Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs

24 March 2017

1 reference

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A mammalian gene with introns instead of exons generating stable RNA products

24 March 2017

1 reference

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Sno storm in the nucleolus: new roles for myriad small RNPs

24 March 2017

1 reference

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Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

7 April 2017

1 reference

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Function and synthesis of small nucleolar RNAs

7 April 2017

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

7 April 2017

1 reference

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Processing of pre-ribosomal RNA in Saccharomyces cerevisiae

7 April 2017

1 reference

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7 April 2017

The small nucleolar RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

A guided tour: small RNA function in Archaea

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Guided tours: from precursor snoRNA to functional snoRNP.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Modification of U6 spliceosomal RNA is guided by other small RNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Trans-acting factors in yeast pre-rRNA and pre-snoRNA processing.

27 September 2017

1 reference

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Small nucleolar RNAs guide ribosomal RNA methylation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Processing of the intron-encoded U16 and U18 snoRNAs: the conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Processing of eukaryotic ribosomal RNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Molecular characterisation of plant U14 small nucleolar RNA genes: closely linked genes are transcribed as polycistronic U14 transcripts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Guiding ribose methylation of rRNA.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Processing of fibrillarin-associated snoRNAs from pre-mRNA introns: an exonucleolytic process exclusively directed by the common stem-box terminal structure

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=135747

Splicing-independent processing of plant box C/D and box H/ACA small nucleolar RNAs

30 May 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12136108

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12136108

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKF426

1 reference

2824709

2824709

1 reference

1 reference

1 reference