Ultrafast folding of WW domains without structured aromatic clusters in the denatured state (Q24555106)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11687613%20AND%20SRC:MED&resulttype=core&format=json

2 December 2019

title

Ultrafast folding of WW domains without structured aromatic clusters in the denatured state (English)

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2 December 2019

3

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2 December 2019

Hartmut Oschkinat

4

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2 December 2019

author name string

Ferguson N

1

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2 December 2019

Johnson CM

2

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2 December 2019

Fersht A

5

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2 December 2019

language of work or name

English

0 references

publication date

30 October 2001

1 reference

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Proceedings of the National Academy of Sciences of the United States of America

2 December 2019

number of pages

6

1 reference

based on heuristic

inferred from page(s)

published in

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2 December 2019

volume

98

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2 December 2019

issue

23

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2 December 2019

page(s)

13002-13007

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Using flexible loop mimetics to extend -value analysis to secondary structure interactions

2 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Solution structure of a Nedd4 WW domain-ENaC peptide complex

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Structural analysis of WW domains and design of a WW prototype

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Structural and functional analysis of the mitotic rotamase Pin1 suggests substrate recognition is phosphorylation dependent

24 March 2017

1 reference

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Calculation of protein extinction coefficients from amino acid sequence data

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

The folding of an enzyme. III. Structure of the transition state for unfolding of barnase analysed by a protein engineering procedure

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Using chimeric immunity proteins to explore the energy landscape for alpha-helical protein folding

7 April 2017

1 reference

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Protein folding and unfolding in microseconds to nanoseconds by experiment and simulation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Mapping the transition state of the WW domain beta-sheet.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Long timescale simulations

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Experiment and theory highlight role of native state topology in SH3 folding

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

WW: An isolated three-stranded antiparallel beta-sheet domain that unfolds and refolds reversibly; evidence for a structured hydrophobic cluster in urea and GdnHCl and a disordered thermal unfolded state

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

A continuous-flow capillary mixing method to monitor reactions on the microsecond time scale.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Folding dynamics and mechanism of beta-hairpin formation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Application of physical organic chemistry to engineered mutants of proteins: Hammond postulate behavior in the transition state of protein folding

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Extrapolation to water of kinetic and equilibrium data for the unfolding of barnase in urea solutions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Folding of chymotrypsin inhibitor 2. 1. Evidence for a two-state transition

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

6 Protein engineering in analysis of protein folding pathways and stability

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Measurement of the dead time of a fluorescence stopped-flow instrument

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

Conformational stability of the Escherichia coli HPr protein: test of the linear extrapolation method and a thermodynamic characterization of cold denaturation.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=60814

How do small single-domain proteins fold?

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Structure and function of the WW domain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Stabilization of proteins by rational design of alpha-helix stability using helix/coil transition theory.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Movement of the position of the transition state in protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Structure of the transition state in the folding process of human procarboxypeptidase A2 activation domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Formation of short-lived protein aggregates directly from the coil in two-state folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

Submillisecond kinetics of protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.221467198

The folding mechanism of a beta-sheet: the WW domain

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1073/PNAS.221467198

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11687613%20AND%20SRC:MED&resulttype=core&format=json

2 December 2019

ADS bibcode

2001PNAS...9813002F

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11687613%20AND%20SRC:MED&resulttype=core&format=json

2 December 2019

2 references