Comprehensive analysis of human endogenous retrovirus transcriptional activity in human tissues with a retrovirus-specific microarray (Q24558698)

1

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Oliver Frank

2

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Udo Zeilfelder

3

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Alex D Greenwood

5

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Rüdiger Hehlmann

6

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Christine Leib-Mösch

Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution

7

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language of work or name

English

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publication date

January 2005

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published in

Journal of Virology

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volume

79

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issue

1

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page(s)

341-52

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cites work

1 reference

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Direct Involvement of HERV-W Env Glycoprotein in Human Trophoblast Cell Fusion and Differentiation

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

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Initial sequencing and analysis of the human genome

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Validation of array-based gene expression profiles by real-time (kinetic) RT-PCR

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An envelope glycoprotein of the human endogenous retrovirus HERV-W is expressed in the human placenta and fuses cells expressing the type D mammalian retrovirus receptor

24 March 2017

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Syncytin is a captive retroviral envelope protein involved in human placental morphogenesis

24 March 2017

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Identification of an active reverse transcriptase enzyme encoded by a human endogenous HERV-K retrovirus

24 March 2017

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Molecular characterization and placental expression of HERV-W, a new human endogenous retrovirus family.

24 March 2017

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On viruses, sex, and motherhood

24 March 2017

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The viruses in all of us: characteristics and biological significance of human endogenous retrovirus sequences

24 March 2017

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Viruses, schizophrenia, and bipolar disorder

24 March 2017

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Initial sequencing and comparative analysis of the mouse genome

24 March 2017

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The envelope glycoprotein of human endogenous retrovirus HERV-W induces cellular resistance to spleen necrosis virus

24 March 2017

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The Opitz syndrome gene Mid1 is transcribed from a human endogenous retroviral promoter

24 March 2017

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Developmental expression of HERV-R (ERV3) and HERV-K in human tissue

24 March 2017

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Evolutionary analyses of the human genome

24 March 2017

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Retroviruses and primate evolution

24 March 2017

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Expression of an endogenous retrovirus (ERV3 HERV-R) in human reproductive and embryonic tissues--evidence for a function for envelope gene products

24 March 2017

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Abundance of an Endogenous Retroviral Envelope Protein in Placental Trophoblasts Suggests a Biological Function

24 March 2017

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Identification of human endogenous retroviruses with complex mRNA expression and particle formation

24 March 2017

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Repbase update: a database and an electronic journal of repetitive elements

24 March 2017

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Large-scale determination of the methylation status of retrotransposons in different tissues using a methylation tags approach.

7 April 2017

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Role of endogenous retroviruses in autoimmune diseases

27 September 2017

1 reference

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Quantitation of HERV-K env gene expression and splicing in human breast cancer

27 September 2017

1 reference

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Characterization of a novel human endogenous retrovirus, HERV-H/F, expressed in human leukemia cell lines

27 September 2017

1 reference

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A novel gene from the human endogenous retrovirus K expressed in transformed cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Solitary human endogenous retroviruses-K LTRs retain transcriptional activity in vivo, the mode of which is different in different cell types

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Syncytin, a novel human endogenous retroviral gene in human placenta: evidence for its dysregulation in preeclampsia and HELLP syndrome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Rec (formerly Corf) function requires interaction with a complex, folded RNA structure within its responsive element rather than binding to a discrete specific binding site

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Functional activity of HERV-K-T47D-related long terminal repeats

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Cell type-specific expression and promoter activity of human endogenous retroviral long terminal repeats

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Endogenous retroviruses and the human germline

27 September 2017

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Genomes were forged by massive bombardments with retroelements and retrosequences

27 September 2017

1 reference

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Corf, the Rev/Rex homologue of HTDV/HERV-K, encodes an arginine-rich nuclear localization signal that exerts a trans-dominant phenotype when mutated

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Endogenous retroviruses and multiple sclerosis

27 September 2017

1 reference

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Rapid identification of all known retroviral reverse transcriptase sequences with a novel versatile detection assay

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Identification and characterization of novel human endogenous retrovirus families by phylogenetic screening of the human genome mapping project database

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

A rev-like NES mediates cytoplasmic localization of HERV-K cORF.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Germ cell expression of an isolated human endogenous retroviral long terminal repeat of the HERV-K/HTDV family in transgenic mice.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Transcriptional activation of endogenous retroviral sequences in human epidermal keratinocytes by UVB irradiation.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

The pathogenic potential of endogenous retroviruses: facts and fantasies

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Expression of the human endogenous retrovirus HTDV/HERV-K is enhanced by cellular transcription factor YY1

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Human-specific integrations of the HERV-K endogenous retrovirus family

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Proviral structure, chromosomal location, and expression of HERV-K-T47D, a novel human endogenous retrovirus derived from T47D particles.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Transcription of human endogenous retroviral sequences related to mouse mammary tumor virus in human breast and placenta: similar pattern in most malignant and nonmalignant breast tissues

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Expression of human endogenous retrovirus K elements in germ cell and trophoblastic tumors.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Evolution and biological significance of human retroelements

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

Human endogenous retrovirus K10 encodes a functional integrase.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=538696

The promoter activity of long terminal repeats of the HERV-H family of human retrovirus-like elements is critically dependent on Sp1 family proteins interacting with a GC/GT box located immediately 3' to the TATA box

27 September 2017

1 reference

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Evidence for a functional subclass of the RTVL-H family of human endogenous retrovirus-like sequences

27 September 2017

1 reference

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Characterization of novel reverse transcriptase encoding human endogenous retroviral sequences similar to type A and type B retroviruses: differential transcription in normal human tissues

27 September 2017

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Stimulation of expression of the human endogenous retrovirus genome by female steroid hormones in human breast cancer cell line T47D.

27 September 2017

1 reference

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Detection of multiple, novel reverse transcriptase coding sequences in human nucleic acids: relation to primate retroviruses

27 September 2017

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Autonomous expression of RTVL-H endogenous retroviruslike elements in human cells

27 September 2017

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The evolution of placental mammals

27 September 2017

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Functional heterogeneity of a large family of human LTR-like promoters and enhancers

27 September 2017

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Identification of regulatory elements within the minimal promoter region of the human endogenous ERV9 proviruses: accurate transcription initiation is controlled by an Inr-like element

27 September 2017

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Gain of Sp1 sites and loss of repressor sequences associated with a young, transcriptionally active subset of HERV-H endogenous long terminal repeats

27 September 2017

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Characterization of the human endogenous retrovirus K proteinase

27 September 2017

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27 September 2017

Our retroviral heritage

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An almost-intact human endogenous retrovirus K on human chromosome 7.

27 September 2017

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Human endogenous retrovirus (HERV)-K transcripts in germ cell and trophoblastic tumours

30 May 2018

1 reference

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Endogenous retroviruses and the evolution of resistance to retroviral infection.

30 May 2018

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Comparative analyses of LTRs of the ERV-H family of primate-specific retrovirus-like elements isolated from marmoset, African green monkey, and man.

30 May 2018

1 reference

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Determinants of target gene specificity for steroid/thyroid hormone receptors

30 May 2018

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Assessment of retroviral activity using a universal retrovirus chip

30 May 2018

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Human-specific subfamilies of HERV-K (HML-2) long terminal repeats: three master genes were active simultaneously during branching of hominoid lineages.

28 November 2018

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A HERV-K provirus in chimpanzees, bonobos and gorillas, but not humans

28 November 2018

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Characterization of Human MMTV-like (HML) Elements Similar to a Sequence That Was Highly Expressed in a Human Breast Cancer: Further Definition of the HML-6 Group

28 November 2018

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Beneficial role of human endogenous retroviruses: facts and hypotheses

28 November 2018

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Differential expression of human endogenous retroviral sequences similar to mouse mammary tumor virus in normal peripheral blood mononuclear cells

28 November 2018

1 reference

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A highly divergent retroviral sequence in the tuatara (Sphenodon).

28 November 2018

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The long terminal repeats of the HERV-H human endogenous retrovirus contain binding sites for transcriptional regulation by the Myb protein

28 November 2018

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12 December 2020

Analysis of transcriptional regulatory sequences in the human endogenous retrovirus W long terminal repeat

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12 December 2020

Comparison of mRNA gene expression by RT-PCR and DNA microarray

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12 December 2020

Detecting the expression of human endogenous retrovirus E envelope transcripts in human prostate adenocarcinoma

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12 December 2020

Solitary HERV-K LTRs possess bi-directional promoter activity and contain a negative regulatory element in the U5 region

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12 December 2020

Retinal VEGF mRNA measured by SYBR green I fluorescence: A versatile approach to quantitative PCR

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12 December 2020

Expression of human endogenous retrovirus k envelope transcripts in human breast cancer

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12 December 2020

[Gene products of human endogenous retrovirus (HERV)-K in germ cell and trophoblastic tumors]

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12 December 2020

Human Endogenous Retroviral Sequences: Possible Roles in Reproductive Physiopathology1

1 reference

12 December 2020