OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling (Q24575548)

Assessing unmodified 70-mer oligonucleotide probe performance on glass-slide microarrays

Crossref

volume

31

0 references

issue

13

0 references

page(s)

3758-3762

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Medical applications of microarray technologies: a regulatory science perspective

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Oliz, a suite of Perl scripts that assist in the design of microarrays using 50mer oligonucleotides from the 3' untranslated region

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

LNA-enhanced detection of single nucleotide polymorphisms in the apolipoprotein E.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Use of hybridization kinetics for differentiating specific from non-specific binding to oligonucleotide microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Optimization of oligonucleotide-based DNA microarrays.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Identification of a novel cis-regulatory element involved in the heat shock response in Caenorhabditis elegans using microarray gene expression and computational methods

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

An assessment of Motorola CodeLink microarray performance for gene expression profiling applications

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Clustering of hepatotoxins based on mechanism of toxicity using gene expression profiles

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

DNA arrays for analysis of gene expression

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

High density synthetic oligonucleotide arrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Expression monitoring by hybridization to high-density oligonucleotide arrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Exploring the metabolic and genetic control of gene expression on a genomic scale

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

A DNA microarray system for analyzing complex DNA samples using two-color fluorescent probe hybridization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Identification of common molecular subsequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Improved tools for biological sequence comparison

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Speeding up the dynamic algorithm for planar RNA folding

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Selection of optimal DNA oligos for gene expression arrays

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Monitoring expression of genes involved in drug metabolism and toxicology using DNA microarrays

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168986

Genotyping of the apolipoprotein B R3500Q mutation using immobilized locked nucleic acid capture probes

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824412

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

OligoArray: genome-scale oligonucleotide design for microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824412

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Thermodynamics and NMR of internal G.T mismatches in DNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824412

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG580

1 reference

journals/nar/TolstrupNKFVK03

3590089

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

3590089

1 reference

1 reference

1 reference