Crystal structure of the APOBEC3G catalytic domain reveals potential oligomerization interfaces (Q24599263)

identical protein binding

GOA release 2020-03-11

1 reference

GOA release 2020-03-11

13

Reuben S Harris

0 references

Celia A. Schiffer

15

object named as

Celia A Schiffer

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author name string

Shivender M D Shandilya

1

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Madhavi N L Nalam

2

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Ellen A Nalivaika

3

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Phillip J Gross

4

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Johnathan C Valesano

5

0 references

Keisuke Shindo

6

0 references

Ming Li

7

0 references

Mary Munson

8

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William E Royer

9

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Elena Harjes

10

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Takahide Kono

11

0 references

Hiroshi Matsuo

12

0 references

Mohan Somasundaran

An extended structure of the APOBEC3G catalytic domain suggests a unique holoenzyme model

14

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language of work or name

English

0 references

publication date

13 January 2010

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published in

Structure

0 references

volume

18

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page(s)

28-38

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issue

1

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cites work

1 reference

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Structure, interaction and real-time monitoring of the enzymatic reaction of wild-type APOBEC3G

24 March 2017

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Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications

24 March 2017

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HIV-1 Vif, APOBEC, and intrinsic immunity

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Structure of human cytidine deaminase bound to a potent inhibitor

24 March 2017

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Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G

24 March 2017

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The structure of a yeast RNA-editing deaminase provides insight into the fold and function of activation-induced deaminase and APOBEC-1

24 March 2017

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The cytidine deaminase CEM15 induces hypermutation in newly synthesized HIV-1 DNA

24 March 2017

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An anthropoid-specific locus of orphan C to U RNA-editing enzymes on chromosome 22

24 March 2017

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Structure of the DNA deaminase domain of the HIV-1 restriction factor APOBEC3G

24 March 2017

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The APOBEC-2 crystal structure and functional implications for the deaminase AID

24 March 2017

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Crystal structure of the tetrameric cytidine deaminase from Bacillus subtilis at 2.0 A resolution

24 March 2017

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24 March 2017

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Inference of macromolecular assemblies from crystalline state

24 March 2017

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Optimal description of a protein structure in terms of multiple groups undergoing TLS motion

24 March 2017

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Refinement of macromolecular structures by the maximum-likelihood method

24 March 2017

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24 March 2017

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Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein

24 March 2017

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RNA-dependent oligomerization of APOBEC3G is required for restriction of HIV-1

24 March 2017

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APOBEC3F properties and hypermutation preferences indicate activity against HIV-1 in vivo

24 March 2017

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Induction of APOBEC3G Ubiquitination and Degradation by an HIV-1 Vif-Cul5-SCF Complex

24 March 2017

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DNA deamination mediates innate immunity to retroviral infection

24 March 2017

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Broad antiretroviral defence by human APOBEC3G through lethal editing of nascent reverse transcripts

24 March 2017

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Hypermutation of HIV-1 DNA in the Absence of the Vif Protein

24 March 2017

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APOBEC3G: an intracellular centurion

24 March 2017

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An algorithm for progressive multiple alignment of sequences with insertions

24 March 2017

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7 April 2017

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Intracellular interactions between APOBEC3G, RNA, and HIV-1 Gag: APOBEC3G multimerization is dependent on its association with RNA.

27 September 2017

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Re-refinement from deposited X-ray data can deliver improved models for most PDB entries

27 September 2017

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APOBEC proteins and intrinsic resistance to HIV-1 infection

27 September 2017

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The artiodactyl APOBEC3 innate immune repertoire shows evidence for a multi-functional domain organization that existed in the ancestor of placental mammals

27 September 2017

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Guidelines for naming nonprimate APOBEC3 genes and proteins

27 September 2017

1 reference

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APOBEC3G subunits self-associate via the C-terminal deaminase domain

27 September 2017

1 reference

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Two regions within the amino-terminal half of APOBEC3G cooperate to determine cytoplasmic localization

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

The AID/APOBEC family of nucleic acid mutators.

27 September 2017

1 reference

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The APOBEC3 cytidine deaminases: an innate defensive network opposing exogenous retroviruses and endogenous retroelements

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

The DNA deaminase activity of human APOBEC3G is required for Ty1, MusD, and human immunodeficiency virus type 1 restriction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

T cells contain an RNase-insensitive inhibitor of APOBEC3G deaminase activity

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

RNA binding-independent dimerization of adenosine deaminases acting on RNA and dominant negative effects of nonfunctional subunits on dimer functions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Nanostructures of APOBEC3G support a hierarchical assembly model of high molecular mass ribonucleoprotein particles from dimeric subunits.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

High-molecular-mass APOBEC3G complexes restrict Alu retrotransposition

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

An overview of cytidine deaminases

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Monomeric APOBEC3G is catalytically active and has antiviral activity.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

The Vif and Gag proteins of human immunodeficiency virus type 1 colocalize in infected human T cells

27 September 2017

1 reference

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Cytidine deaminase. The 2.3 A crystal structure of an enzyme: transition-state analog complex

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Evolution of HIV-1 isolates that use a novel Vif-independent mechanism to resist restriction by human APOBEC3G.

27 September 2017

1 reference

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Extensive mutagenesis experiments corroborate a structural model for the DNA deaminase domain of APOBEC3G.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Crystal structure of Staphylococcus aureus tRNA adenosine deaminase TadA in complex with RNA.

30 May 2018

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Evolution of the AID/APOBEC family of polynucleotide (deoxy)cytidine deaminases.

28 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Rapid evolution of primate antiviral enzyme APOBEC3G.

28 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2913127

Cytidine deaminases from B. subtilis and E. coli: compensating effects of changing zinc coordination and quaternary structure

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20152150

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

New protein structures replace the old

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20152150

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Processing of X-ray diffraction data collected in oscillation mode

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20152150

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.STR.2009.10.016

1 reference

2005398

2005398

1 reference

1 reference

1 reference