CharProtDB: a database of experimentally characterized protein annotations (Q24621984)

4

Lauren Brinkac

0 references

Robert J Dodson

3

Robert J Dodson

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Ramana Madupu

1

Ramana Madupu

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Susmita Shrivastava

7

Susmita Shrivastava

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author name string

Alexander Richter

2

0 references

Derek Harkins

5

0 references

Scott Durkin

6

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Granger Sutton

Creative Commons Attribution-NonCommercial 3.0 Unported

8

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language of work or name

English

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publication date

January 2012

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published in

Nucleic Acids Research

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volume

40

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issue

Database issue

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page(s)

D237-41

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copyright license

start time

12 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

COMBREX: a project to accelerate the functional annotation of prokaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

EcoCyc: a comprehensive database of Escherichia coli biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Ongoing and future developments at the Universal Protein Resource

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

The Transporter Classification Database: recent advances

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

TIGRFAMs and Genome Properties: tools for the assignment of molecular function and biological process in prokaryotic genomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Protein molecular function prediction by Bayesian phylogenomics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Biological systems discovery in silico: radical S-adenosylmethionine protein families and their target peptides for posttranslational modification

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

A catalog of reference genomes from the human microbiome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

The Gene Ontology in 2010: extensions and refinements

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

The comprehensive microbial resource

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

A statistical model of protein sequence similarity and function similarity reveals overly-specific function predictions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

New tools at the Candida Genome Database: biochemical pathways and full-text literature search

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

ExplorEnz: the primary source of the IUBMB enzyme list

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Gene Ontology annotation status of the fission yeast genome: preliminary coverage approaches 100%.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

MGOS: A resource for studying Magnaporthe grisea and Oryza sativa interactions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Enzyme function less conserved than anticipated.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3245046

journals/nar/MadupuRDBHDSSH12

27 September 2017

Identifiers

DOI

10.1093/NAR/GKR1133

0 references

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02