Genomic structure and comparative analysis of nine Fugu genes: conservation of synteny with human chromosome Xp22.2-p22.1 (Q24626326)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10330123%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

title

Genomic structure and comparative analysis of nine Fugu genes: conservation of synteny with human chromosome Xp22.2-p22.1. (English)

1 reference

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8 December 2019

7

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8 December 2019

author name string

B Brunner

1

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8 December 2019

T Todt

2

1 reference

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8 December 2019

S Lenzner

3

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8 December 2019

K Stout

4

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8 December 2019

U Schulz

5

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8 December 2019

H H Ropers

6

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8 December 2019

language of work or name

English

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publication date

1 May 1999

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8 December 2019

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8 December 2019

volume

9

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8 December 2019

issue

5

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8 December 2019

page(s)

437-448

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Identification and characterization of a novel serine-threonine kinase gene from the Xp22 region

8 December 2019

cites work

1 reference

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Characterization of SCML1, a new gene in Xp22, with homology to developmental polycomb genes

7 April 2017

1 reference

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Transgenic rats reveal functional conservation of regulatory controls between the Fugu isotocin and rat oxytocin genes

7 April 2017

1 reference

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Positional cloning of the gene associated with X-linked juvenile retinoschisis

7 April 2017

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Identification and characterization of a conserved family of protein serine/threonine phosphatases homologous to Drosophila retinal degeneration C

7 April 2017

1 reference

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A novel human serine-threonine phosphatase related to the Drosophila retinal degeneration C (rdgC) gene is selectively expressed in sensory neurons of neural crest origin

7 April 2017

1 reference

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PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames

7 April 2017

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RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

7 April 2017

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Methods and algorithms for statistical analysis of protein sequences

7 April 2017

1 reference

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cDNA cloning of a liver isoform of the phosphorylase kinase alpha subunit and mapping of the gene to Xp22.2-p22.1, the region of human X-linked liver glycogenosis

7 April 2017

1 reference

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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

7 April 2017

1 reference

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Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification

7 April 2017

1 reference

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Mutation hotspots in the PHKA2 gene in X-linked liver glycogenosis due to phosphorylase kinase deficiency with atypical activity in blood cells (XLG2)

7 April 2017

1 reference

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Mutations in the phosphorylase kinase gene PHKA2 are responsible for X-linked liver glycogen storage disease

7 April 2017

1 reference

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AP17 and AP19, the mammalian small chains of the clathrin-associated protein complexes show homology to Yap17p, their putative homolog in yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Complete sequencing of the Fugu WAGR region from WT1 to PAX6: dramatic compaction and conservation of synteny with human chromosome 11p13.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

The comparative genomic structure and sequence of the surfeit gene homologs in the puffer fish Fugu rubripes and their association with CpG-rich islands.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Drosophila kelch is an oligomeric ring canal actin organizer

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Conservation of synteny between the genome of the pufferfish (Fugu rubripes) and the region on human chromosome 14 (14q24.3) associated with familial Alzheimer disease (AD3 locus)

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Isolation and mapping of human homologues of an imprinted mouse gene U2af1-rs1.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Characterization of the pufferfish (Fugu) genome as a compact model vertebrate genome

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Drosophila kelch motif is derived from a common enzyme fold

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Cloning and sequencing of complement component C9 and its linkage to DOC-2 in the pufferfish Fugu rubripes.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Conserved linkage between the puffer fish (Fugu rubripes) and human genes for platelet-derived growth factor receptor and macrophage colony-stimulating factor receptor.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

CENSOR--a program for identification and elimination of repetitive elements from DNA sequences.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Analysis of the dopamine receptor family in the compact genome of the puffer fish Fugu rubripes.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Comparative sequence analysis of the human and pufferfish Huntington's disease genes

30 May 2018

1 reference

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Genomic structure and nucleotide sequence of the p55 gene of the puffer fish Fugu rubripes.

30 May 2018

1 reference

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Rhodopsin activation causes retinal degeneration in Drosophila rdgC mutant

30 May 2018

1 reference

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Drosophila retinal degeneration C (rdgC) encodes a novel serine/threonine protein phosphatase

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Regions of human chromosome 2 (2q32-q35) and mouse chromosome 1 show synteny with the pufferfish genome (Fugu rubripes).

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

How good a model is the Fugu genome?

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

The insulin–like growth factor type–2 receptor gene is imprinted in the mouse but not in humans

28 November 2018

1 reference

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The Caenorhabditis elegans spe-26 gene is necessary to form spermatids and encodes a protein similar to the actin-associated proteins kelch and scruin.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Genomic structure and sequence of the Fugu rubripes glucose-6-phosphate dehydrogenase gene (G6PD).

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=310778

Confidence Limits on Phylogenies: an Approach using the Bootstrap

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10330123

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Fugu genome is not a good mammalian model

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10330123

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

How good a model is the Fugu genome?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10330123

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10330123%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

1 reference