Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates (Q24631147)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

title

Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

author name string

Federico G Hoffmann

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

Jay F Storz

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

language of work or name

English

0 references

publication date

26 July 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

8 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

volume

107

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

issue

32

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

page(s)

14274-14279

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features

8 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

ProbCons: Probabilistic consistency-based multiple sequence alignment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

RETRACTED: TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

MUSCLE: multiple sequence alignment with high accuracy and high throughput

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Characterization of a stellate cell activation-associated protein (STAP) with peroxidase activity found in rat hepatic stellate cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

A vertebrate globin expressed in the brain

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Chance and necessity: the evolution of morphological complexity and diversity

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Crystal structures of deoxy- and carbonmonoxyhemoglobin F1 from the hagfish Eptatretus burgeri

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

The 2.7 A crystal structure of deoxygenated hemoglobin from the sea lamprey (Petromyzon marinus): structural basis for a lowered oxygen affinity and Bohr effect

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

The rapid generation of mutation data matrices from protein sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Diversity of globin function: enzymatic, transport, storage, and sensing

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Structural basis of human cytoglobin for ligand binding

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Likelihood-based tests of topologies in phylogenetics

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

A ubiquitously expressed human hexacoordinate hemoglobin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Phylogenetic origins and adaptive evolution of avian and mammalian haemoglobin genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Darwinian evolution in the genealogy of haemoglobin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Molecular models for the putative dimer of sea lamprey hemoglobin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Recent developments in the MAFFT multiple sequence alignment program

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

An improved general amino acid replacement matrix

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

An approximately unbiased test of phylogenetic tree selection

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Turning a hobby into a job: how duplicated genes find new functions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

An algorithm for progressive multiple alignment of sequences with insertions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Lineage-specific patterns of functional diversification in the alpha- and beta-globin gene families of tetrapod vertebrates

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

What is the function of neuroglobin?

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

PROMALS3D web server for accurate multiple protein sequence and structure alignments

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Genomic evidence for independent origins of beta-like globin genes in monotremes and therian mammals

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

A model of globin evolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Time scale for cyclostome evolution inferred with a phylogenetic diagnosis of hagfish and lamprey cDNA sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Molecular phylogeny and divergence times of deuterostome animals

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Functional properties of neuroglobin and cytoglobin. Insights into the ancestral physiological roles of globins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Reversible hexa- to penta-coordination of the heme Fe atom modulates ligand binding properties of neuroglobin and cytoglobin

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Neuroglobin and cytoglobin in search of their role in the vertebrate globin family

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Functional adaptation and its molecular basis in vertebrate hemoglobins, neuroglobins and cytoglobins

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

The Bohr effect of haemoglobin in vertebrates: an example of molecular adaptation to different physiological requirements

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Red blood cell pH, the Bohr effect, and other oxygenation-linked phenomena in blood O2 and CO2 transport

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

DIALIGN: multiple DNA and protein sequence alignment at BiBiServ

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Neuroglobin and cytoglobin. Fresh blood for the vertebrate globin family

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Gene co-option in physiological and morphological evolution

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Generation of evolutionary novelty by functional shift

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Evolutionary change in the functional specificity of genes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Self-association, cooperativity and supercooperativity of oxygen binding by hemoglobins.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Hemoglobin function in the vertebrates: An evolutionary model

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

An evolutionary tree for invertebrate globin sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Alignment uncertainty and genomic analysis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

eProbalign: generation and manipulation of multiple sequence alignments using partition function posterior probabilities

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Hemoglobins from bacteria to man: evolution of different patterns of gene expression.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

30 May 2018

Primitive haemoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

Neuroglobin, cytoglobin, and a novel, eye-specific globin from chicken

30 May 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

The amphibian globin gene repertoire as revealed by the Xenopus genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

Neuroglobin and cytoglobin: genes, proteins and evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

Lamprey hemoglobin. Structural basis of the bohr effect.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

Hagfish hemoglobins: structure, function, and oxygen-linked association

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

Cyclostome hemoglobins are possibly paralogous to gnathostome hemoglobins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

Model Selection in Phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

A globin gene of ancient evolutionary origin in lower vertebrates: evidence for two distinct globin families in animals

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2922537

High-resolution structure of human cytoglobin: identification of extra N- and C-termini and a new dimerization mode

28 November 2018

1 reference

12 December 2020

THE SIX HEMOGLOBINS OF THE SEA LAMPREY (PETROMYZON MARINUS)

1 reference

12 December 2020

Haemoglobin function in intact Lampetra fluviatilis erythrocytes

1 reference

12 December 2020

Stereochemistry of cooperative mechanisms in hemoglobin

1 reference

12 December 2020

Bicarbonate binding to hemoglobin links oxygen and carbon dioxide transport in hagfish

1 reference

12 December 2020

Water regulates oxygen binding in hagfish (Myxine glutinosa) hemoglobin

1 reference

12 December 2020

Studies on hemoglobin from the hagfish Epatatretus burgeri

1 reference

12 December 2020

Sedimentation equilibriujm experiments on the self-assocation of hemoglobin from the lamprey Petromyzon marinus. A model for oxygen transport in the lamprey

1 reference

12 December 2020

Characterization of the changes in the state of aggregation induced by ligand binding in the hemoglobin system of a primitive vertebrate, the hagfish Eptatretus cirrhatus

1 reference

12 December 2020

The Amino Acid Sequence of Hemoglobin V from the Lamprey, Petromyzon marinus

1 reference

12 December 2020

Haemoglobin H+ equilibria in lamprey (Lampetra fluviatilis) and hagfish (Myxine glutinosa)

1 reference

12 December 2020

The hemoglobin system of the hagfish Myxine glutinosa: aggregation state and functional properties

1 reference

12 December 2020

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1006756107

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1073/PNAS.1006756107

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20660759%20AND%20SRC:MED&resulttype=core&format=json

8 February 2020

PubMed publication ID

20660759

1 reference