Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer (Q24633484)

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Structure of the RNA 3′-Phosphate Cyclase-Adenylate Intermediate Illuminates Nucleotide Specificity and Covalent Nucleotidyl Transfer

Language	Label	Description	Also known as
English	Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer	scientific article	Structure of the RNA 3′-Phosphate Cyclase-Adenylate Intermediate Illuminates Nucleotide Specificity and Covalent Nucleotidyl Transfer

Statements

scholarly article

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Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer (English)

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structural biology

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author name string

Naoko Tanaka

1

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Paul Smith

2

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Stewart Shuman

3

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language of work or name

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publication date

14 March 2010

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18

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4

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449-57

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Structure-based analysis of catalysis and substrate definition in the HIT protein family

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The human RNA 3'-terminal phosphate cyclase is a member of a new family of proteins conserved in Eucarya, Bacteria and Archaea.

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7 April 2017

RNA 3'-terminal phosphate cyclase activity and RNA ligation in HeLa cell extract

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Phosphorylated and dephosphorylated structures of pig heart, GTP-specific succinyl-CoA synthetase

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Crystal structure of RNA 3'-terminal phosphate cyclase, a ubiquitous enzyme with unusual topology

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A detailed structural description of Escherichia coli succinyl-CoA synthetase

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AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP

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The structure of nucleotidylated histidine-166 of galactose-1-phosphate uridylyltransferase provides insight into phosphoryl group transfer

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Mechanism of phosphate transfer by nucleoside diphosphate kinase: X-ray structures of the phosphohistidine intermediate of the enzymes from Drosophila and Dictyostelium

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Phasercrystallographic software

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Coot: model-building tools for molecular graphics

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PHENIX: building new software for automated crystallographic structure determination

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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7 April 2017

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7 April 2017

Structure-activity relationships in human RNA 3'-phosphate cyclase

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

27 September 2017

Junction phosphate is derived from the precursor in the tRNA spliced by the archaeon Haloferax volcanii cell extract

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

27 September 2017

RNA ligation via 2'-phosphomonoester, 3'5'-phosphodiester linkage: requirement of 2',3'-cyclic phosphate termini and involvement of a 5'-hydroxyl polynucleotide kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

27 September 2017

Purification of RNA 3'-terminal-phosphate cyclase from HeLa cells. Covalent modification of the enzyme with different nucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

27 September 2017

The enzymatic conversion of 3'-phosphate terminated RNA chains to 2',3'-cyclic phosphate derivatives.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

27 September 2017

Cyclization of RNA 3'-terminal phosphate by cyclase from HeLa cells proceeds via formation of N(3')pp(5')A activated intermediate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

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Bacteriophage T4 anticodon nuclease, polynucleotide kinase and RNA ligase reprocess the host lysine tRNA.

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Conserved mechanism of tRNA splicing in eukaryotes

1 reference

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RNA repair: an antidote to cytotoxic eukaryal RNA damage

1 reference

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30 May 2018

Characterization of the Escherichia coli RNA 3'-terminal phosphate cyclase and its sigma54-regulated operon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

28 November 2018

Characterization of tRNA precursor splicing in mammalian extracts.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858066

28 November 2018

RNA 3'-terminal phosphate cyclase from HeLa cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/20399182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Origin of splice junction phosphate in tRNAs processed by HeLa cell extract

1 reference

https://pubmed.ncbi.nlm.nih.gov/20399182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the adenylation site in the RNA 3'-terminal phosphate cyclase from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/20399182

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.STR.2010.01.016

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