Sequence-structure analysis of FAD-containing proteins (Q24644689)

The crystal structure of D-lactate dehydrogenase, a peripheral membrane respiratory enzyme

Europe PubMed Central

title

Sequence-structure analysis of FAD-containing proteins (English)

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O Dym

1

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D Eisenberg

series ordinal

2

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language of work or name

English

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publication date

September 2001

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published in

Protein Science

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volume

10

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issue

9

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page(s)

1712-28

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cites work

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Three-dimensional structure of NADPH-cytochrome P450 reductase: prototype for FMN- and FAD-containing enzymes

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Three-dimensional structure of human electron transfer flavoprotein to 2.1-A resolution

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Structural prototypes for an extended family of flavoprotein reductases: comparison of phthalate dioxygenase reductase with ferredoxin reductase and ferredoxin

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Structural analysis of flavinylation in vanillyl-alcohol oxidase

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Structures of the flavocytochrome p-cresol methylhydroxylase and its enzyme-substrate complex: gated substrate entry and proton relays support the proposed catalytic mechanism

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Crystal structure of reduced thioredoxin reductase from Escherichia coli: Structural flexibility in the isoalloxazine ring of the flavin adenine dinucleotide cofactor

7 April 2017

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Structure and mechanism of the flavocytochrome c fumarate reductase of Shewanella putrefaciens MR-1

7 April 2017

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Crystal structure of human quinone reductase type 2, a metalloflavoprotein

7 April 2017

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The structure of adrenodoxin reductase of mitochondrial P450 systems: electron transfer for steroid biosynthesis

7 April 2017

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Monomeric sarcosine oxidase: structure of a covalently flavinylated amine oxidizing enzyme

7 April 2017

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A 30-angstrom-long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase

7 April 2017

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Crystal structure of Trypanosoma cruzi trypanothione reductase in complex with trypanothione, and the structure-based discovery of new natural product inhibitors

7 April 2017

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1.8 and 1.9 A resolution structures of the Penicillium amagasakiense and Aspergillus niger glucose oxidases as a basis for modelling substrate complexes

7 April 2017

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The structure and properties of methylenetetrahydrofolate reductase from Escherichia coli suggest how folate ameliorates human hyperhomocysteinemia

7 April 2017

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Crystal structure determination of cholesterol oxidase from Streptomyces and structural characterization of key active site mutants

7 April 2017

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Crystal structure of Paracoccus denitrificans electron transfer flavoprotein: structural and electrostatic analysis of a conserved flavin binding domain

7 April 2017

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The crystal structure of phenol hydroxylase in complex with FAD and phenol provides evidence for a concerted conformational change in the enzyme and its cofactor during catalysis

7 April 2017

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Lys42 and Ser42 variants of p-hydroxybenzoate hydroxylase from Pseudomonas fluorescens reveal that Arg42 is essential for NADPH binding

7 April 2017

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Structure of human isovaleryl-CoA dehydrogenase at 2.6 A resolution: structural basis for substrate specificity,

7 April 2017

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The three-dimensional structure of flavodoxin reductase from Escherichia coli at 1.7 A resolution

7 April 2017

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X-ray crystal structures of the S229A mutant and wild-type MurB in the presence of the substrate enolpyruvyl-UDP-N-acetylglucosamine at 1.8-A resolution

7 April 2017

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Three-dimensional structure of porcine kidney D-amino acid oxidase at 3.0 A resolution

7 April 2017

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Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase

7 April 2017

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Structure of the native cysteine-sulfenic acid redox center of enterococcal NADH peroxidase refined at 2.8 A resolution

7 April 2017

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The refined structures of a stabilized mutant and of wild-type pyruvate oxidase from Lactobacillus plantarum

7 April 2017

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The structure of flavocytochrome c sulfide dehydrogenase from a purple phototrophic bacterium

7 April 2017

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Crystal structure of NADH-cytochrome b5 reductase from pig liver at 2.4 A resolution

7 April 2017

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Crystal Structure of DNA Photolyase from Escherichia coli

7 April 2017

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Refined structure of glutathione reductase at 1.54 A resolution

7 April 2017

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7 April 2017

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Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

7 April 2017

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LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions

7 April 2017

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New sequence motifs in flavoproteins: evidence for common ancestry and tools to predict structure

7 April 2017

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Comparison of super-secondary structures in proteins

7 April 2017

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Chemical and biological evolution of nucleotide-binding protein

7 April 2017

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Rubredoxin reductase of Pseudomonas oleovorans. Structural relationship to other flavoprotein oxidoreductases based on one NAD and two FAD fingerprints

7 April 2017

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Prediction of the occurrence of the ADP-binding beta alpha beta-fold in proteins, using an amino acid sequence fingerprint

7 April 2017

1 reference

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The crystal structure of NADPH:ferredoxin reductase from Azotobacter vinelandii

7 April 2017

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Covalent structure of the flavoprotein subunit of the flavocytochrome c: sulfide dehydrogenase from the purple phototrophic bacterium Chromatium vinosum

27 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253189

Crystal structure of the FAD-containing fragment of corn nitrate reductase at 2.5 A resolution: relationship to other flavoprotein reductases

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253189

Phosphate-binding sequences in nucleotide-binding proteins

27 September 2017

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Atomic structure of ferredoxin-NADP+ reductase: prototype for a structurally novel flavoenzyme family

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253189

A novel oxidoreductase family sharing a conserved FAD-binding domain.

27 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253189

Structure of the semiquinone form of flavodoxin from Clostridum MP. Extension of 1.8 A resolution and some comparisons with the oxidized state

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253189

A 30 Å long U-shaped catalytic tunnel in the crystal structure of polyamine oxidase

30 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1110%2FPS.12801

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

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Crossref

https://api.crossref.org/works/10.1110%2FPS.12801

Topological comparison of adenyl kinase with other proteins

21 January 2018

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12 December 2020

Comparison of the three-dimensional protein and nucleotide structure of the FAD-binding domain of p-hydroxybenzoate hydroxylase with the FAD- as well as NADPH-binding domains of glutathione reductase

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12 December 2020

Automatic updating of the EMBL database via EMBNet

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12 December 2020

FAD-binding site of glutathione reductase

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12 December 2020

Identifiers

DOI

10.1110/PS.12801

1 reference

1 reference

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PubMed publication ID

11514662

1 reference