Transcription inactivation through local refolding of the RNA polymerase structure (Q24647306)

9

object named as

Evgeny Nudler

0 references

Georgiy Belogurov

object named as

Georgiy A Belogurov

1

0 references

Stephen E. Webber

7

object named as

Stephen E Webber

0 references

author name string

Marina N Vassylyeva

2

0 references

Anastasiya Sevostyanova

3

0 references

James R Appleman

4

0 references

Alan X Xiang

5

0 references

Ricardo Lira

6

0 references

Sergiy Klyuyev

8

0 references

Dmitry G Vassylyev

The sigma70 family of sigma factors

11

0 references

language of work or name

English

0 references

publication date

15 January 2009

0 references

published in

Nature

0 references

volume

457

0 references

issue

7227

0 references

page(s)

332-5

0 references

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis for substrate loading in bacterial RNA polymerase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis for transcription elongation by bacterial RNA polymerase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural Basis for Converting a General Transcription Factor into an Operon-Specific Virulence Regulator

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Real-time footprinting of DNA in the first kinetically significant intermediate in open complex formation by Escherichia coli RNA polymerase

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Structure-based analysis of RNA polymerase function: the largest subunit's rudder contributes critically to elongation complex stability and is not involved in the maintenance of RNA-DNA hybrid length

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

A mutant RNA polymerase that forms unusual open promoter complexes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Distortion in the spacer region of Pm during activation of middle transcription of phage Mu.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

The myxopyronins, new inhibitors of bacterial RNA synthesis from Myxococcus fulvus (Myxobacterales).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

DNA footprints of the two kinetically significant intermediates in formation of an RNA polymerase-promoter open complex: evidence that interactions with start site and downstream DNA induce sequential conformational changes in polymerase and DNA.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Two open complexes and a requirement for Mg2+ to open the lambda PR transcription start site

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Syntheses of novel myxopyronin B analogs as potential inhibitors of bacterial RNA polymerase.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

DNA-melting at the Bacillus subtilis flagellin promoter nucleates near -10 and expands unidirectionally.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628454

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18946472

12 December 2020

inferred from PubMed ID database lookup

Stimulation of open complex formation by nicks and apurinic sites suggests a role for nucleation of DNA melting in Escherichia coli promoter function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18946472

12 December 2020

inferred from PubMed ID database lookup

The myxopyronins, new inhibitors of bacterial RNA synthesis from Myxococcus fulvus (Myxobacterales).

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme fromThermus thermophilus

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Structural basis for transcription regulation by alarmone ppGpp.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Structural basis of transcription inhibition by antibiotic streptolydigin.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Structural basis for transcription inhibition by tagetitoxin

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Further additions to MolScript version 1.4, including reading and contouring of electron-density maps

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Raster3D: photorealistic molecular graphics

1 reference

https://api.crossref.org/works/10.1038%2FNATURE07510

7 January 2021

Identifiers

DOI

10.1038/NATURE07510

1 reference

Dimensions Publication ID

1043621066

0 references

1 reference

1 reference

PubMed publication ID

18946472

1 reference