TreeFam: 2008 Update (Q24650511)

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Language	Label	Description	Also known as
English	TreeFam: 2008 Update	scientific article

Statements

scholarly article

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TreeFam: 2008 Update (English)

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18

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Richard M. Durbin

19

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Abel Ureta-Vidal

16

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17

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Karsten Kristiansen

9

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Jean-Karim Hériché

7

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Albert J. Vilella

object named as

Albert J Vilella

15

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object named as

Søren Vang

14

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object named as

Heng Li

2

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10

object named as

Ruiqiang Li

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13

object named as

Junjie Qin

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1

object named as

Jue Ruan

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4

object named as

Avril Coghlan

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author name string

Zhongzhong Chen

3

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Lachlan James M Coin

5

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Yiran Guo

6

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Yafeng Hu

8

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Tao Liu

11

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Alan Moses

12

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language of work or name

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publication date

January 2008

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Nucleic Acids Research

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36

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Database issue

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D735-40

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Database resources of the National Center for Biotechnology Information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Functional classification using phylogenomic inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

TreeFam: a curated database of phylogenetic trees of animal gene families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

The Universal Protein Resource (UniProt): an expanding universe of protein information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Inparanoid: a comprehensive database of eukaryotic orthologs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

The SYSTERS Protein Family Database in 2005

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

The COG database: an updated version includes eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Orthologs, paralogs, and evolutionary genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Distinguishing Homologous from Analogous Proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

7 April 2017

Schistosoma mansoni genome: closing in on a final gene set.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

The human phylome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

The UCSC genome browser database: update 2007.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

WormBase: new content and better access

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

FlyBase: genomes by the dozen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

PhyloFacts: an online structural phylogenomic encyclopedia for protein functional and structural classification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

GeneDB: a resource for prokaryotic and eukaryotic organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

The HUGO Gene Nomenclature Committee (HGNC).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2238856

28 September 2017

KinasePhos: a web tool for identifying protein kinase-specific phosphorylation sites

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1005

21 January 2018

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1005

21 January 2018

My worries are no longer behind me.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKM1005

21 January 2018

Identifiers

10.1093/NAR/GKM1005

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

DBLP publication ID

journals/nar/RuanLCCCGHHKLLMQVVUBWD08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

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