Nematode.net update 2008: improvements enabling more efficient data mining and comparative nematode genomics (Q24656022)

1

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Sahar Abubucker

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Todd Wylie

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Yong Yin

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Zhengyuan Wang

The Pfam protein families database

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language of work or name

English

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publication date

January 2009

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published in

Nucleic Acids Research

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volume

37

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issue

Database issue

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page(s)

D571-8

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cites work

1 reference

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prot4EST: translating expressed sequence tags from neglected genomes

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The Pfam protein families database

7 April 2017

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The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

7 April 2017

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Analysis and functional classification of transcripts from the nematode Meloidogyne incognita

7 April 2017

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The generic genome browser: a building block for a model organism system database

7 April 2017

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7 April 2017

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On the Extent and Origins of Genic Novelty in the Phylum Nematoda

7 April 2017

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The PSIPRED protein structure prediction server

7 April 2017

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An efficient algorithm for large-scale detection of protein families

7 April 2017

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Soil-transmitted helminth infections: ascariasis, trichuriasis, and hookworm

7 April 2017

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MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes

7 April 2017

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KAAS: an automatic genome annotation and pathway reconstruction server

7 April 2017

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Adaptive evolution and explosive speciation: the cichlid fish model

7 April 2017

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A combined transmembrane topology and signal peptide prediction method

7 April 2017

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A molecular evolutionary framework for the phylum Nematoda

7 April 2017

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Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans

7 April 2017

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The canine hookworm genome: analysis and classification of Ancylostoma caninum survey sequences

28 September 2017

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28 September 2017

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Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines

28 September 2017

1 reference

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Parasitic nematodes - from genomes to control.

28 September 2017

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Plant parasitic nematode proteins and the host parasite interaction

28 September 2017

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Rapid evolution of reproductive proteins in abalone and Drosophila.

28 September 2017

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Rh proteins vs Amt proteins: an organismal and phylogenetic perspective on CO2 and NH3 gas channels

28 September 2017

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Genomic filtering: an approach to discovering novel antiparasitics

28 September 2017

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The global burden of intestinal nematode infections--fifty years on.

28 September 2017

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The DISOPRED server for the prediction of protein disorder

28 September 2017

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Getting to the roots of parasitism by nematodes

28 September 2017

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Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans

28 September 2017

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NEMBASE: a resource for parasitic nematode ESTs

28 September 2017

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Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes

28 September 2017

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Parasitic nematode interactions with mammals and plants

28 September 2017

1 reference

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Molecular evolution, adaptive radiation, and geographic diversification in the amphiatlantic family Rapateaceae: evidence from ndhF sequences and morphology

28 September 2017

1 reference

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Characterization of plant nematode genes: identifying targets for a transgenic defence

28 September 2017

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Divergence of genes encoding non-specific lipid transfer proteins in the poaceae family.

28 September 2017

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SSEP-Domain: protein domain prediction by alignment of secondary structure elements and profiles

28 November 2018

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A transcriptomic analysis of the phylum Nematoda

28 November 2018

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28 November 2018

Identifiers

DOI

10.1093/NAR/GKN744

1 reference

journals/nar/MartinAWYWM09

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 reference

PubMed publication ID

18940860

1 reference