PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria (Q24671890)

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5 November 2019

title

PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria (English)

1 reference

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5 November 2019

main subject

Gram-negative bacteria

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author

Gábor E. Tusnády

5

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5 November 2019

Christophe Lambert

9

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5 November 2019

1

Jennifer L Gardy

1 reference

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5 November 2019

author name string

Cory Spencer

2

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5 November 2019

Ke Wang

3

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5 November 2019

Martin Ester

4

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5 November 2019

István Simon

6

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5 November 2019

Sujun Hua

7

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5 November 2019

Katalin deFays

8

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5 November 2019

Kenta Nakai

10

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5 November 2019

Fiona S L Brinkman

11

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5 November 2019

language of work or name

English

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publication date

1 July 2003

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5 November 2019

published in

Nucleic Acids Research

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5 November 2019

volume

31

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5 November 2019

issue

13

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5 November 2019

page(s)

3613-3617

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Using neural networks for prediction of the subcellular location of proteins

5 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Predicting protein subcellular localisation from amino acid sequence information

7 April 2017

1 reference

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The HMMTOP transmembrane topology prediction server

7 April 2017

1 reference

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Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Protein sorting signals and prediction of subcellular localization

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

The PROSITE database, its status in 1999

7 April 2017

1 reference

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Principles governing amino acid composition of integral membrane proteins: application to topology prediction

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Expert system for predicting protein localization sites in gram-negative bacteria

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

7 April 2017

1 reference

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Sequence conserved for subcellular localization

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Extensive feature detection of N-terminal protein sorting signals

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

A comparison of signal sequence prediction methods using a test set of signal peptides

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Membrane protein biogenesis: the exception explains the rules

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Signals for protein targeting into and across membranes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Wanted: subcellular localization of proteins based on sequence

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

Support vector machine approach for protein subcellular localization prediction

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=169008

28 November 2018

Identifiers

DOI

10.1093/NAR/GKG602

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12824378%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/GardySWETSHFLNB03

5 November 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

2 references

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5 November 2019

PubMed publication ID

12824378

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12824378%20AND%20SRC:MED&resulttype=core&format=json