High fidelity of RecA-catalyzed recombination: a watchdog of genetic diversity (Q24672935)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16990254%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

title

High fidelity of RecA-catalyzed recombination: a watchdog of genetic diversity (English)

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30 December 2019

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2

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30 December 2019

author name string

Dror Sagi

series ordinal

1

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30 December 2019

Joel Stavans

series ordinal

3

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30 December 2019

language of work or name

English

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publication date

20 September 2006

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30 December 2019

published in

Nucleic Acids Research

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30 December 2019

volume

34

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30 December 2019

issue

18

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30 December 2019

page(s)

5021-5031

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How do site-specific DNA-binding proteins find their targets?

30 December 2019

cites work

1 reference

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Mfold web server for nucleic acid folding and hybridization prediction

7 April 2017

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Protein-DNA computation by stochastic assembly cascade

7 April 2017

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Barriers to genetic exchange between bacterial species: Streptococcus pneumoniae transformation

7 April 2017

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Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria

7 April 2017

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Biochemistry of homologous recombination in Escherichia coli

7 April 2017

1 reference

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Kinetic Proofreading: A New Mechanism for Reducing Errors in Biosynthetic Processes Requiring High Specificity

7 April 2017

1 reference

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High-Fidelity DNA Sensing by Protein Binding Fluctuations

7 April 2017

1 reference

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Initiation of genetic recombination and recombination-dependent replication

7 April 2017

1 reference

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Kinetic amplification of enzyme discrimination

7 April 2017

1 reference

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Polyproline and the "spectroscopic ruler" revisited with single-molecule fluorescence.

7 April 2017

1 reference

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Exchange of DNA base pairs that coincides with recognition of homology promoted by E. coli RecA protein

28 September 2017

1 reference

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Modulation of DNA conformations through the formation of alternative high-order HU-DNA complexes

28 September 2017

1 reference

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The Bacterial RecA Protein as a Motor Protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Stretching DNA and RNA to probe their interactions with proteins.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Hallmarks of homology recognition by RecA-like recombinases are exhibited by the unrelated Escherichia coli RecT protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Bypass of heterology during strand transfer by Saccharomyces cerevisiae Rad51 protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

RecA-mediated strand exchange traverses substitutional heterologies more easily than deletions or insertions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Recombinational DNA repair in bacteria and the RecA protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Three mechanistic steps detected by FRET after presynaptic filament formation in homologous recombination. ATP hydrolysis required for release of oligonucleotide heteroduplex product from RecA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Polarity of DNA strand exchange promoted by recombination proteins of the RecA family

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Heteroduplex joint formation in Escherichia coli recombination is initiated by pairing of a 3'-ending strand

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Dissociation kinetics of RecA protein-three-stranded DNA complexes reveals a low fidelity of RecA-assisted recognition of homology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

RecA tests homology at both pairing and strand exchange

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

RecA protein assisted selection reveals a low fidelity of recognition of homology in a duplex DNA by an oligonucleotide

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Formation of base triplets by non-Watson-Crick bonds mediates homologous recognition in RecA recombination filaments

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Kinetic proofreading in T-cell receptor signal transduction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

DNA-strand exchange promoted by RecA protein in the absence of ATP: implications for the mechanism of energy transduction in protein-promoted nucleic acid transactions

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Polar branch migration promoted by recA protein: effect of mismatched base pairs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Heteroduplex formation by recA protein: polarity of strand exchanges

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Ability of RecA protein to promote a search for rare sequences in duplex DNA

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Homologous recombination in Escherichia coli: dependence on substrate length and homology

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Duplication mutation as an SOS response in Escherichia coli: enhanced duplication formation by a constitutively activated RecA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Energetics of RecA-mediated recombination reactions. Without ATP hydrolysis RecA can mediate polar strand exchange but is unable to recycle

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

The simultaneous binding of two double-stranded DNA molecules by Escherichia coli RecA protein

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Effect of length and location of heterologous sequences on RecA-mediated strand exchange.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

The barrier to recombination between Escherichia coli and Salmonella typhimurium is disrupted in mismatch-repair mutants

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Calculation of sequence divergence from the thermal stability of DNA heteroduplexes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Inhibition of recA protein promoted ATP hydrolysis. 1. ATP gamma S and ADP are antagonistic inhibitors.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Unwinding of heterologous DNA by RecA protein during the search for homologous sequences

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636419

Cellular response to horizontally transferred DNA in Escherichia coli is tuned by DNA repair systems

28 November 2018

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12 December 2020

Insertions, deletions and mismatches in heteroduplex DNA made by recA protein

1 reference

12 December 2020

Networks of DNA and RecA protein are intermediates in homologous pairing

1 reference

12 December 2020

The search for DNA homology does not limit stable homologous pairing promoted by RecA protein

1 reference

12 December 2020

Characterization of the DNA binding activity of stable RecA-DNA complexes. Interaction between the two DNA binding sites within RecA helical filaments

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKL586

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16990254%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

1 reference

1 reference

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30 December 2019

PubMed publication ID

16990254

2 references