Gene content and function of the ancestral chromosome fusion site in human chromosome 2q13-2q14.1 and paralogous regions (Q24682165)

1

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Tera Newman

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Elena Linardopoulou

3

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Barbara J Trask

Mutations in FOXC2 (MFH-1), a forkhead family transcription factor, are responsible for the hereditary lymphedema-distichiasis syndrome

4

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language of work or name

English

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publication date

November 2002

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published in

Genome Research

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volume

12

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issue

11

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page(s)

1663-72

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cites work

1 reference

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Two novel human RAB genes with near identical sequence each map to a telomere-associated region: the subtelomeric region of 22q13.3 and the ancestral telomere band 2q13

7 April 2017

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PAX8 mutations associated with congenital hypothyroidism caused by thyroid dysgenesis

7 April 2017

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Cloning, sequencing, gene organization, and localization of the human ribosomal protein RPL23A gene

7 April 2017

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

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Characterization of putative human homologues of the yeast chromosome transmission fidelity gene, CHL1

7 April 2017

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Chromosomal localization of six human forkhead genes, freac-1 (FKHL5), -3 (FKHL7), -4 (FKHL8), -5 (FKHL9), -6 (FKHL10), and -8 (FKHL12)

7 April 2017

1 reference

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A novel dystrophin/utrophin-associated protein is an enzymatically inactive member of the phosphoglucomutase superfamily

7 April 2017

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Alternative splicing of Pax-8 gene transcripts is developmentally regulated and generates isoforms with different transactivation properties

7 April 2017

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The retroviral oncogene qin belongs to the transcription factor family that includes the homeotic gene fork head

7 April 2017

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Cloning and characterization of seven human forkhead proteins: binding site specificity and DNA bending

7 April 2017

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Molecular cloning of the cDNA for the human U2 snRNA-specific A' protein

7 April 2017

1 reference

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Origin of human chromosome 2: an ancestral telomere-telomere fusion

7 April 2017

1 reference

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The evolutionary fate and consequences of duplicate genes

7 April 2017

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SEC7 encodes an unusual, high molecular weight protein required for membrane traffic from the yeast Golgi apparatus.

7 April 2017

1 reference

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A forkhead-domain gene is mutated in a severe speech and language disorder

7 April 2017

1 reference

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Unified nomenclature for the winged helix/forkhead transcription factors

7 April 2017

1 reference

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Differentially regulated and evolved genes in the fully sequenced Xq/Yq pseudoautosomal region

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

The forkhead transcription factor gene FKHL7 is responsible for glaucoma phenotypes which map to 6p25

7 April 2017

1 reference

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A human exchange factor for ARF contains Sec7- and pleckstrin-homology domains

7 April 2017

1 reference

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A novel human phosphoglucomutase (PGM5) maps to the centromeric region of chromosome 9

7 April 2017

1 reference

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Unbiased estimation of the rates of synonymous and nonsynonymous substitution

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Fluorescence in situ hybridization mapping of human chromosome 19: cytogenetic band location of 540 cosmids and 70 genes or DNA markers

7 April 2017

1 reference

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The origin of man: a chromosomal pictorial legacy

7 April 2017

1 reference

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A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes

7 April 2017

1 reference

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The evolutionary origin of human subtelomeric homologies--or where the ends begin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Genome architecture, rearrangements and genomic disorders

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Genomic structure and evolution of the ancestral chromosome fusion site in 2q13-2q14.1 and paralogous regions on other human chromosomes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Segmental duplications and the evolution of the primate genome

28 September 2017

1 reference

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Identification of a novel retina-specific gene located in a subtelomeric region with polymorphic distribution among multiple human chromosomes.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Human-specific duplication and mosaic transcripts: the recent paralogous structure of chromosome 22.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Transcriptional activity of multiple copies of a subtelomerically located olfactory receptor gene that is polymorphic in number and location

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Comparative sequencing of a multicopy subtelomeric region containing olfactory receptor genes reveals multiple interactions between non-homologous chromosomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Identification of dopamine responsive mRNAs in glial cells by suppression subtractive hybridization

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Controlling small guanine-nucleotide-exchange factor function through cytoplasmic RNA intramers

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Structure of chromosomal duplicons and their role in mediating human genomic disorders

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Members of the olfactory receptor gene family are contained in large blocks of DNA duplicated polymorphically near the ends of human chromosomes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Alternatively spliced insertions in the paired domain restrict the DNA sequence specificity of Pax6 and Pax8.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Evolution by the birth-and-death process in multigene families of the vertebrate immune system

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Localization of chi1-related helicase genes to human chromosome regions 12p11 and 12p13: similarity between parts of these genes and conserved human telomeric-associated DNA.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Five years on the wings of fork head

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Ectopic neural expression of a floor plate marker in frog embryos injected with the midline transcription factor Pintallavis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

A strategy to detect and isolate an intron-containing gene in the presence of multiple processed pseudogenes

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Nucleotide sequence and genetic analysis of a 13.1-kilobase-pair Pseudomonas denitrificans DNA fragment containing five cob genes and identification of structural genes encoding Cob(I)alamin adenosyltransferase, cobyric acid synthase, and bifunction

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

The CHL 1 (CTF 1) gene product of Saccharomyces cerevisiae is important for chromosome transmission and normal cell cycle progression in G2/M

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

The mouse fkh-2 gene. Implications for notochord, foregut, and midbrain regionalization.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

A human 12p-derived cosmid hybridizing to subsets of human and chimpanzee telomeres

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Structure and polymorphism of human telomere-associated DNA.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Hepatocyte nuclear factor 3 alpha belongs to a gene family in mammals that is homologous to the Drosophila homeotic gene fork head

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

Newly identified repeat sequences, derived from human chromosome 21qter, are also localized in the subtelomeric region of particular chromosomes and 2q13, and are conserved in the chimpanzee genome.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=187549

What PAX genes do in the kidney

28 November 2018

1 reference

12 December 2020

A high-resolution genetic map of mouse chromosome 19 encompassing the muscle-deficient osteochondrodystrophy (mdf-ocd) region

1 reference

12 December 2020

Molecular analysis of a novel subtelomeric repeat with polymorphic chromosomal distribution

1 reference

12 December 2020

The mouse mutation muscle deficient (mdf) is characterized by a progressive motoneuron disease

1 reference

12 December 2020

Isolation of the human chromosome 22q telomere and its application to detection of cryptic chromosomal abnormalities

1 reference

12 December 2020

Identifiers

DOI

10.1101/GR.338402

1 reference

3337972

3337972

1 reference

1 reference

1 reference