Consensus clustering and functional interpretation of gene-expression data (Q24791011)

7

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author name string

Stephen Swift

1

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Allan Tucker

2

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Veronica Vinciotti

3

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Nigel Martin

4

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Xiaohui Liu

Clustering gene-expression data with repeated measurements

6

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language of work or name

English

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publication date

2004

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published in

Genome Biology

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volume

5

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issue

11

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page(s)

R94

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cites work

1 reference

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7 April 2017

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XBP1 mRNA is induced by ATF6 and spliced by IRE1 in response to ER stress to produce a highly active transcription factor

7 April 2017

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Mammalian transcription factor ATF6 is synthesized as a transmembrane protein and activated by proteolysis in response to endoplasmic reticulum stress

7 April 2017

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Cluster analysis and display of genome-wide expression patterns

7 April 2017

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Identification of the cis-acting endoplasmic reticulum stress response element responsible for transcriptional induction of mammalian glucose-regulated proteins. Involvement of basic leucine zipper transcription factors

7 April 2017

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Optimization by Simulated Annealing

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Genomic expression programs in the response of yeast cells to environmental changes

7 April 2017

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NF-kappa B and Rel proteins: evolutionarily conserved mediators of immune responses

7 April 2017

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7 April 2017

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IRE1 couples endoplasmic reticulum load to secretory capacity by processing the XBP-1 mRNA

7 April 2017

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Computational analysis of microarray data

7 April 2017

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Kaposi's sarcoma-associated herpesvirus-infected primary effusion lymphoma has a plasma cell gene expression profile

7 April 2017

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NF-kappa B-dependent assembly of an enhanceosome-like complex on the promoter region of apoptosis inhibitor Bfl-1/A1

28 September 2017

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Computationally identifying novel NF-kappa B-regulated immune genes in the human genome

28 September 2017

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Comparisons and validation of statistical clustering techniques for microarray gene expression data

28 September 2017

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28 September 2017

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Methods for assessing reproducibility of clustering patterns observed in analyses of microarray data

28 September 2017

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Judging the quality of gene expression-based clustering methods using gene annotation

28 September 2017

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Statistical estimation of cluster boundaries in gene expression profile data

28 September 2017

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Bootstrapping cluster analysis: assessing the reliability of conclusions from microarray experiments

28 September 2017

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Validating clustering for gene expression data.

28 September 2017

1 reference

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Clustering gene expression patterns

28 September 2017

1 reference

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Regulation of the dolichol pathway in human fibroblasts by the endoplasmic reticulum unfolded protein response

28 September 2017

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28 September 2017

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Bagging to improve the accuracy of a clustering procedure

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545785

Analysis of temporal gene expression profiles: clustering by simulated annealing and determining the optimal number of clusters

30 May 2018

1 reference

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Variable grouping in multivariate time series via correlation

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15535870

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A time-dependent phase shift in the mammalian unfolded protein response

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15535870

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2004-5-11-R94

1 reference

Dimensions Publication ID

1023643640

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1 reference

1 reference

PubMed publication ID

15535870

1 reference