XHM: a system for detection of potential cross hybridizations in DNA microarrays (Q24791450)

Outliers involving the Poly(A) effect among highly-expressed genes in microarrays

Europe PubMed Central

title

XHM: a system for detection of potential cross hybridizations in DNA microarrays (English)

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Fekadu Yadetie

2

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Inge Jonassen

object named as

Inge Jonassen

series ordinal

4

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author name string

Kristian Flikka

series ordinal

1

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Astrid Laegreid

series ordinal

3

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language of work or name

English

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publication date

27 August 2004

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published in

BMC Bioinformatics

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volume

5

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issue

1

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page(s)

117

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Initial sequencing and analysis of the human genome

7 April 2017

1 reference

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Basic local alignment search tool

7 April 2017

1 reference

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Expression monitoring by hybridization to high-density oligonucleotide arrays

7 April 2017

1 reference

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Quantitative monitoring of gene expression patterns with a complementary DNA microarray

7 April 2017

1 reference

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The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression

7 April 2017

1 reference

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RefSeq and LocusLink: NCBI gene-centered resources

7 April 2017

1 reference

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Database resources of the National Center for Biotechnology Information: update

7 April 2017

1 reference

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PROBEmer: A web-based software tool for selecting optimal DNA oligos

7 April 2017

1 reference

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Design of oligonucleotides for microarrays and perspectives for design of multi-transcriptome arrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Differential gene expression patterns revealed by oligonucleotide versus long cDNA arrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

28 September 2017

1 reference

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Perspective: microarray technology, seeing more than spots

28 September 2017

1 reference

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Hybridization cross-reactivity within homologous gene families on glass cDNA microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays

28 September 2017

1 reference

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Microarray analysis of developing Arabidopsis seeds

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarrays

28 September 2017

1 reference

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The TIGR gene indices: reconstruction and representation of expressed gene sequences

28 September 2017

1 reference

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Fast sequence clustering using a suffix array algorithm

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Cross-hybridization on PCR-spotted microarrays

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Microarray-based analysis of gene expression in very large gene families: the cytochrome P450 gene superfamily of Arabidopsis thaliana.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=517492

Avoiding cross hybridization by choosing nonredundant targets on cDNA arrays

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15333145

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-5-117

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DBLP publication ID

journals/bmcbi/FlikkaYLJ04

1 reference

DBLP Dataset 2021-01-02