The non-LTR retrotransposons in Ciona intestinalis: new insights into the evolution of chordate genomes (Q24793303)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14611659

31 March 2024

author name string

Jon Permanyer

series ordinal

1

0 references

Roser Gonzàlez-Duarte

series ordinal

2

0 references

language of work or name

English

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publication date

2003

0 references

21 October 2003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14611659

full work available at URL

31 March 2024

https://genomebiology.biomedcentral.com/counter/pdf/10.1186/gb-2003-4-11-r73

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14611659

https://europepmc.org/articles/PMC329123

31 March 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14611659

https://europepmc.org/articles/PMC329123?pdf=render

31 March 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14611659

https://link.springer.com/content/pdf/10.1186/gb-2003-4-11-r73.pdf

31 March 2024

file format

Portable Document Format

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1186/GB-2003-4-11-R73

https://link.springer.com/article/10.1186/gb-2003-4-11-r73/fulltext.html

31 March 2024

1 reference

https://api.crossref.org/works/10.1186/GB-2003-4-11-R73

31 March 2024

0 references

4

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issue

11

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page(s)

R73

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exact match

https://scigraph.springernature.com/pub.10.1186/gb-2003-4-11-r73

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cites work

A search for reverse transcriptase-coding sequences reveals new non-LTR retrotransposons in the genome of Drosophila melanogaster

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

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7 April 2017

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The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

7 April 2017

1 reference

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The Genome Sequence of the Malaria Mosquito Anopheles gambiae

7 April 2017

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Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

7 April 2017

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7 April 2017

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Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

7 April 2017

1 reference

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Cytosine methylation and the ecology of intragenomic parasites

7 April 2017

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Origin and evolution of retroelements based upon their reverse transcriptase sequences

7 April 2017

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Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes

7 April 2017

1 reference

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NeSL-1, an ancient lineage of site-specific non-LTR retrotransposons from Caenorhabditis elegans.

28 September 2017

1 reference

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The age and evolution of non-LTR retrotransposable elements

28 September 2017

1 reference

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The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods

28 September 2017

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Copy number control of a transposable element, the I factor, a LINE-like element in Drosophila.

28 September 2017

1 reference

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Chicken repeat 1 elements contain a pol-like open reading frame and belong to the non-long terminal repeat class of retrotransposons

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Inactivation of gene expression in plants as a consequence of specific sequence duplication

28 September 2017

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Eukaryotic transposable elements and genome evolution

28 September 2017

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28 September 2017

Transposable elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Genome analysis of Amphioxus and speculation as to the origin of contrasting vertebrate genome organization patterns

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Isolation and characterization of the first non-autonomous transposable element in amphioxus, ATE-1.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Sequence analysis of transposable elements in the sea squirt, Ciona intestinalis.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Structural, genomic, and phylogenetic analysis of Lian, a novel family of non-LTR retrotransposons in the yellow fever mosquito, Aedes aegypti

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Do non-long terminal repeat retrotransposons have nuclease activity?

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Transposable elements controlling I-R hybrid dysgenesis in D. melanogaster are similar to mammalian LINEs.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

The first non-LTR retrotransposon characterised in the cephalochordate amphioxus, BfCR1, shows similarities to CR1-like elements.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Evolutionary dynamics in a novel L2 clade of non-LTR retrotransposons in Deuterostomia.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Nonmethylated transposable elements and methylated genes in a chordate genome.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

Taming of transposable elements by homology-dependent gene silencing.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=329123

The evolutionary dynamics of repetitive DNA in eukaryotes

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14611659

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Computer applications in the biosciences : CABIOS

29

12

357

RDM Page

1996

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1186/GB-2003-4-11-R73

31 March 2024

Identifiers

DOI