DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs (Q24797037)

2 July 2017

DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs (English)

1 reference

2 July 2017

1

Cédric Feschotte

1 reference

2 July 2017

4

Susan R Wessler

1 reference

2 July 2017

Mark T Osterlund

2

1 reference

PubMed ID

15831788

2 July 2017

Ryan Peeler

series ordinal

3

1 reference

PubMed ID

15831788

2 July 2017

language of work or name

English

0 references

publication date

14 April 2005

1 reference

2 July 2017

Nucleic Acids Research

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2 July 2017

33

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2 July 2017

7

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2 July 2017

2153-2165

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Crystal structure of a paired domain-DNA complex at 2.5 A resolution reveals structural basis for Pax developmental mutations

2 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Expanding the diversity of the IS630-Tc1-mariner superfamily: discovery of a unique DD37E transposon and reclassification of the DD37D and DD39D transposons

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Microhomology-dependent end joining and repair of transposon-induced DNA hairpins by host factors in Saccharomyces cerevisiae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Pax genes and eye organogenesis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Involvement of a bifunctional, paired-like DNA-binding domain and a transpositional enhancer in Sleeping Beauty transposition

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Plant transposable elements: where genetics meets genomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

The genetic control of eye development and its implications for the evolution of the various eye-types

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Mariner-like transposases are widespread and diverse in flowering plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

DNA-binding activity and subunit interaction of the mariner transposase

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Molecular paleontology of transposable elements from Arabidopsis thaliana

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Resident aliens: the Tc1/mariner superfamily of transposable elements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

A purified mariner transposase is sufficient to mediate transposition in vitro

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Cooperative interactions between paired domain and homeodomain.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Mobile Minos elements from Drosophila hydei encode a two-exon transposase with similarity to the paired DNA-binding domain

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Interaction mating reveals binary and ternary connections between Drosophila cell cycle regulators.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Improved detection of helix-turn-helix DNA-binding motifs in protein sequences

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Non-autonomous mobile elements in the crenarchaeon Sulfolobus solfataricus

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

The complete sequence of 340 kb of DNA around the rice Adh1-adh2 region reveals interrupted colinearity with maize chromosome 4.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Characterization of Soymar1, a mariner element in soybean.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Crystal structure of the specific DNA-binding domain of Tc3 transposase of C.elegans in complex with transposon DNA.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Tourist: a large family of small inverted repeat elements frequently associated with maize genes

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

Loss of transposase-DNA interaction may underlie the divergence of mariner family transposable elements and the ability of more than one mariner to occupy the same genome.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1079968

A helix-turn-helix DNA-binding motif predicted for transposases of DNA transposons

28 November 2018

1 reference

12 December 2020

Regulatory potential of nonautonomous mariner elements and subfamily crosstalk

1 reference

12 December 2020

Transposition of maize Ac/Ds transposable elements in the yeast Saccharomyces cerevisiae

1 reference

12 December 2020

Survey of transposable elements from rice genomic sequences

1 reference

12 December 2020

The wild-type conformation of the Mos-1 inverted terminal repeats is suboptimal for transposition in bacteria

1 reference

12 December 2020

The ITR binding domain of the Mariner Mos-1 transposase

1 reference

12 December 2020

Whole-genome organization and functional properties of miniature DNA insertion sequences conserved in pathogenic Neisseriae

1 reference

12 December 2020

Transposon-like Correia elements: structure, distribution and genetic exchange between pathogenic Neisseria sp

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKI509

1 reference

2 July 2017

0 references

1 reference

PubMed ID

15831788